Files in mi-erasmusmc/TreatmentPatterns
A package to analyse real-world treatment patterns of a study population of interest
DESCRIPTION
NAMESPACE
R/ConstructPathways.R
R/cohortCharacterization.R
R/createCohorts.R
R/createSettings.R
R/executeTreatmentPatterns.R
R/generateOutput.R
R/helperFunctions.R
R/launchResultsExplorer.R
README.md
TreatmentPatterns.Rproj
docs/TreatmentPatternsStudy.Rmd
docs/TreatmentPatternsStudy.pdf
docs/TreatmentPatterns_1.0.0.pdf
docs/package.png
docs/pathwaysettings.png
docs/sankeydiagram.png
docs/sunburstplot.png
inst/SQL/CohortCounts.sql
inst/SQL/CohortDrugProcedureTemplate.sql
inst/SQL/CohortDrugTemplate.sql
inst/SQL/CreateCohortTable.sql
inst/SQL/CreateInclusionStatsTables.sql
inst/examples/OMOP CDM/inst/cohorts/JSON/Amlodipine.json
inst/examples/OMOP CDM/inst/cohorts/JSON/Hydrochlorothiazide.json
inst/examples/OMOP CDM/inst/cohorts/JSON/Hypertension.json
inst/examples/OMOP CDM/inst/cohorts/JSON/Lisinopril.json
inst/examples/OMOP CDM/inst/cohorts/JSON/Losartan.json
inst/examples/OMOP CDM/inst/cohorts/JSON/Metorolol.json
inst/examples/OMOP CDM/inst/cohorts/SQL/Amlodipine.sql
inst/examples/OMOP CDM/inst/cohorts/SQL/Hydrochlorothiazide.sql
inst/examples/OMOP CDM/inst/cohorts/SQL/Hypertension.sql
inst/examples/OMOP CDM/inst/cohorts/SQL/Lisinopril.sql
inst/examples/OMOP CDM/inst/cohorts/SQL/Losartan.sql
inst/examples/OMOP CDM/inst/cohorts/SQL/Metorolol.sql
inst/examples/OMOP CDM/inst/settings/characterization_settings.csv
inst/examples/OMOP CDM/inst/settings/cohorts_to_create.csv
inst/examples/OMOP CDM/inst/settings/pathway_settings.csv
inst/examples/other format/inst/cohorts/input_cohorts.csv
inst/examples/other format/inst/settings/cohorts_to_create.csv
inst/examples/other format/inst/settings/pathway_settings.csv
inst/examples/sequences.csv
inst/shiny/global.R
inst/shiny/html/custom.html
inst/shiny/html/databasesInfo.html
inst/shiny/html/sankeydiagram.html
inst/shiny/html/treatmentPathways.html
inst/shiny/server.R
inst/shiny/sunburst/legend.html
inst/shiny/sunburst/sunburst_shiny.html
inst/shiny/sunburst/sunburst_standalone.html
inst/shiny/ui.R
inst/shiny/www/favicon.ico
inst/shiny/www/logo.png
man/addPathwaySettings.Rd
man/cohortCharacterization.Rd
man/constructPathways.Rd
man/createCharacterizationSettings.Rd
man/createCohortSettings.Rd
man/createCohorts.Rd
man/createDataSettings.Rd
man/createPathwaySettings.Rd
man/createSaveSettings.Rd
man/createSunburstPlot.Rd
man/executeTreatmentPatterns.Rd
man/generateOutput.Rd
man/launchResultsExplorer.Rd
