Files in michaelwitting/genedataRutils
Collection of utility functions to work with .gda files in R
.Rbuildignore
.github/.gitignore
.github/workflows/check-standard.yaml
.github/workflows/pkgdown.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
NAMESPACE
R/export_ms2.R
R/parser_gda_files.R
R/utils_gnps.R
R/utils_metabolights.R
R/utils_metid.R
R/utils_ms1.R
R/utils_ms2.R
R/utils_sirius.R
README.md
genedataRutils.Rproj
inst/extdata/20191108_Pesticides_test_Cluster.gda
inst/extdata/20191108_Pesticides_test_Peaks.gda
inst/extdata/AU256301.txt
inst/extdata/AU256302.txt
inst/extdata/AU256303.txt
inst/extdata/AU256304.txt
inst/extdata/AU256305.txt
inst/extdata/AU257101.txt
inst/extdata/AU257102.txt
inst/extdata/AU257103.txt
inst/extdata/AU257104.txt
inst/extdata/AU257105.txt
inst/extdata/MSMSpos_0402_RP_2-A,1_01_15100.mgf
inst/extdata/MSMSpos_0403_RP_2-A,1_01_15101.mgf
inst/extdata/MSMSpos_0404_RP_2-A,1_01_15103.mgf
inst/extdata/MSMSpos_0405_RP_2-A,1_01_15104.mgf
inst/extdata/metIds.tsv
inst/extdata/pesticideLibMs1.tsv
man/addMetid.Rd
man/annotateMz.Rd
man/compareSpectraLibrary.Rd
man/correctRtime.Rd
man/createGnpsFiles.Rd
man/createMtblsMetaboliteFile.Rd
man/createMtblsSampleFile.Rd
man/exportMgf.Rd
man/fillMs1Spectra.Rd
man/fillMs2Spectra.Rd
man/getColAnno.Rd
man/getMsData.Rd
man/getRowAnno.Rd
man/matchIonMode.Rd
man/ms2AddId.Rd
man/ms2AddId2.Rd
man/readGda.Rd
man/reconstructIsoPattern.Rd
man/removeCluster.Rd
man/removeSamples.Rd
man/setColAnno.Rd
man/setMsData.Rd
man/setRowAnno.Rd
man/writeGda.Rd
man/writeSiriusFile.Rd
tests/testthat.R
tests/testthat/test_gda.R
tests/testthat/test_utils_gnps.R
tests/testthat/test_utils_metid.R
tests/testthat/test_utils_ms1.R
tests/testthat/test_utils_ms2.R
vignettes/.gitignore
vignettes/Cluster_0311.ms
vignettes/Cluster_0331.ms
vignettes/Cluster_0444.ms
vignettes/Cluster_0615.ms
vignettes/MS1_spectra.mgf
vignettes/MS2_spectra.mgf
vignettes/export.gda
vignettes/genedataRutils.Rmd
vignettes/m_ID0001
vignettes/m_ID0002
vignettes/s_ID0002.txt
vignettes/sirius_export.ms
