Files in mikeblazanin/gcplyr
Wrangle and Analyze Growth Curve Data
.Rbuildignore
.github/.gitignore
.github/workflows/pkgdown.yaml
.github/workflows/rhub.yaml
.gitignore
CRAN-SUBMISSION
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/data.R
R/example_functions.R
R/functions.R
R/utility_functions.R
README.Rmd
README.md
_pkgdown.yml
cran-comments.md
data-raw/all_data.csv
data-raw/example_design.R
data-raw/example_widedata.R
data/example_design_tidy.rda
data/example_widedata.rda
data/example_widedata_noiseless.rda
gcplyr.Rproj
index.Rmd
index.md
inst/CITATION
man/CentroidFunctions.Rd
man/ExtremaFunctions.Rd
man/MinMaxGC.Rd
man/MovingWindowFunctions.Rd
man/ThresholdFunctions.Rd
man/WhichMinMaxGC.Rd
man/auc.Rd
man/block_tidydesign.Rd
man/calc_deriv.Rd
man/doubling_time.Rd
man/example_design_tidy.Rd
man/example_widedata.Rd
man/example_widedata_noiseless.Rd
man/extr_val.Rd
man/first_peak.Rd
man/from_excel.Rd
man/gc_smooth.spline.Rd
man/import_blockdesigns.Rd
man/import_blockmeasures.Rd
man/lag_time.Rd
man/make_design.Rd
man/make_designpattern.Rd
man/make_example.Rd
man/make_tidydesign.Rd
man/makemethod_train_smooth_data.Rd
man/merge_dfs.Rd
man/paste_blocks.Rd
man/predict_interpolation.Rd
man/print_df.Rd
man/read_blocks.Rd
man/read_tidys.Rd
man/read_wides.Rd
man/separate_tidy.Rd
man/smooth_data.Rd
man/solve_linear.Rd
man/to_excel.Rd
man/train_smooth_data.Rd
man/trans_block_to_wide.Rd
man/trans_wide_to_tidy.Rd
man/uninterleave.Rd
man/write_blocks.Rd
manuscript/Isolate_growth_curves.csv
manuscript/manuscript_figs.R
notes/Example_for_labmeeting.R
notes/Notes.Rmd
notes/Package Schema.pptx
notes/example_for_labmeeting_files/Rep1.csv
notes/example_for_labmeeting_files/Rep2.csv
notes/example_for_labmeeting_files/design_bact.csv
notes/example_for_labmeeting_files/design_phg.csv
notes/example_for_labmeeting_files/summarized.csv
notes/extra_vignette_text.Rmd
notes/plot_downloads.R
notes/read_blocks_inference_logic.xlsx
notes/testing_functions.R
talk_materials/figs_for_talks.R
tests/testthat.R
tests/testthat/allfunctions_argumentsmatching_files/full_matches_ref.csv
tests/testthat/allfunctions_argumentsmatching_files/gcplyr_function_subfunction_calls.csv
tests/testthat/allfunctions_argumentsmatching_files/part_matches_ref.csv
tests/testthat/test_allfunctions_argumentsmatching.R
tests/testthat/test_analysisfunctions.R
tests/testthat/test_derivativefunctions.R
tests/testthat/test_designfunctions.R
tests/testthat/test_importfunctions.R
tests/testthat/test_manipulationfunctions.R
tests/testthat/test_multipleplates.R
tests/testthat/test_readfunctions.R
tests/testthat/test_smoothingfunctions.R
tests/testthat/test_utilityfunctions.R
vignettes/gc01_gcplyr.Rmd
vignettes/gc01_gcplyr.pdf
vignettes/gc02_import_reshape.Rmd
vignettes/gc02_import_reshape.pdf
vignettes/gc03_incorporate_designs.Rmd
vignettes/gc03_incorporate_designs.pdf
vignettes/gc04_preprocess_plot.Rmd
vignettes/gc04_preprocess_plot.pdf
vignettes/gc05_process.Rmd
vignettes/gc05_process.pdf
vignettes/gc06_analyze.Rmd
vignettes/gc06_analyze.pdf
vignettes/gc07_noise.Rmd
vignettes/gc07_noise.pdf
vignettes/gc08_conclusion.Rmd
vignettes/gc08_conclusion.pdf
vignettes/gc09_multiple_plates.Rmd
vignettes/gc09_multiple_plates.pdf
vignettes/gc10_using_make_design.Rmd
vignettes/gc10_using_make_design.pdf
