Man pages for mrajeev08/simrabid
Individual-based model of canine rabies
| add_incursions | Add incursions to infectious line list |
| angle_fun | Helper function for generating angles to move at |
| beta_detect | Observation function: with beta binomial distribution of... |
| beta_detect_monthly | Observation function: with beta binomial distribution of... |
| binom_detect | Observation function: single binomial probability |
| block_cells | Which cells should be considered invalid if movement occurs? |
| cells_away | Generate cell ids for sampling movement to |
| cell_weights | Get cell weights based on covariates or a vector of null... |
| check_sim | Quick summary stats of time series |
| dispersal_lognorm | Dispersal kernel distribution |
| double_I | Doubles the infection line list |
| get_cellweights | Subset weights of cells to the candidate cell ids |
| init | Initialize the simulation |
| move_continuous | Movement in continuous space |
| movement_prob | Movement based on probability |
| nbinom_constrained | Secondary case distribution |
| nbinom_constrained_min | Secondary case distribution with additional constraint on... |
| return_env | Return a list of all objects from parent environment |
| safe_sample | Safer implementation of base sample |
| serial_lognorm | Serial interval distribution |
| setup_sim | Set-up simulation |
| setup_space | Setup spatial bounds of simulation |
| sim_bites | Simulates biting/exposure behavior of currently infected... |
| sim_campaigns | Simulated vaccination campaigns |
| sim_incursions_hardwired | Seed incursions explicitly |
| sim_incursions_pois | Simulate incursions |
| sim_movement_continuous | Simulate individual movements |
| sim_movement_prob | Simulate movement probabilistically |
| simrabid | Simulate a spatially-explicit, individual-based model of... |
| simrabid-package | simrabid: Individual-based model of canine rabies |
| sim_trans | Simulate transmission outcomes of exposures at individual... |
| sim_vacc | Simulate vaccination at individual level |
| steps_weibull | Step length distribution of rabid animal movements |
| use_mget | Return a list of named objects from parent environment |
| valid | Accept a simulated movement |
