mskilab/GxG: GxG: Genomic matrices and pairwise genomic features based on GenomicRanges and data.table

GenomicRanges-based classes for representing, querying, and manipulating matrices of genomic data (ie a map of pairs of genomic coordinates to a numeric value). Applications include visualization and analysis of Hi-C contact maps, barcode overlap in 10X, microhomology heatmaps, pairwise LD, and epistasis.

Getting started

Package details

Maintainer
LicenseGPL-3
Version0.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("mskilab/GxG")
mskilab/GxG documentation built on April 12, 2025, 5:32 p.m.