mskilab/ffTrack: GenomicRanges-based R package for fast, out-of-core memory access and storage of genomic data using ff
ffTrack allows building of objects of large genomically-indexed base- resolution sequence or numeric data for quasi-random out of memory access. ffTrack objects are indexable using GRanges from GenomicRanges package. Underlying files are written as .ffData objects using the ff package.
Getting started
Browse package contents
Package details |
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| Author | Marcin Imielinski <mimielinski@nygenome.org> |
| Bioconductor views | bioc::3.10/BSgenome bioc::3.10/BSgenome.Hsapiens.UCSC.hg19 bioc::3.10/Biostrings bioc::3.10/GenomeInfoDb bioc::3.10/GenomicRanges bioc::3.10/S4Vectors bioc::3.10/rtracklayer |
| Maintainer | Marcin Imielinski <mimielinski@nygenome.org> |
| License | GPL-2 |
| Version | 0.0.0.9000 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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