Files in n8thangreen/tb.outbreak.costing
What the Package Does (One Line, Title Case)
.Rbuildignore
.gitignore
BUGS/model.txt
BUGS/script.R
DESCRIPTION
NAMESPACE
R/VBA_converted.R
R/functions.R
R/grid_arrange_shared_legend.R
R/stan_forest_plot.R
README.html
README.md
output_data/bar_dat.csv
output_data/bar_dat_boot.csv
output_data/bar_dat_boot_mean.csv
output_data/beta_params.csv
output_data/cost_boot_setting.RData
output_data/cost_boot_setting.Rds
output_data/cost_summary_table.csv
output_data/dat_boot_mean_per_inc.csv
output_data/gamma_params.csv
output_data/paper_datatable.csv
output_data/paper_datatable_boot.csv
output_data/paper_table.csv
output_data/pop_summary_table.csv
output_data/pop_summary_table_per_inc.csv
output_data/runif_id.csv
output_data/runif_inc.csv
output_data/runif_ltbi.csv
output_data/runif_screen.csv
output_data/sample_id.csv
output_data/sample_id_mean.csv
output_data/sample_inc.csv
output_data/sample_inc_mean.csv
output_data/sample_ltbi.csv
output_data/sample_ltbi_mean.csv
output_data/sample_screen.csv
output_data/sample_screen_mean.csv
output_data/stacked_per_inc.csv
output_data/summary_psa.csv
output_data/summary_psa_per_id.csv
output_data/summary_psa_per_ltbi.csv
output_data/summary_psa_per_screen.csv
plots/birmingham_cascade.png
plots/birmingham_identified_barplot.png
plots/birmingham_incidents_barplot.png
plots/birmingham_latent_barplot.png
plots/birmingham_screened_barplot.png
plots/ce_plane_per_ltbi.png
plots/ce_plane_per_ltbi2.png
plots/cost per person cascade.png
plots/forest_plot_setting.png
plots/p_ltbi_forest_plot.png
plots/p_screen_forest_plot.png
plots/posterior_counts_cascade.png
plots/posterior_setting_cost_hist.png
plots/posterior_setting_cost_hist_per_inc.png
plots/posterior_setting_cost_hist_per_ltbi.png
plots/rate_id_forest_plot.png
plots/rate_inc_forest_plot.png
plots/stacked_barplot_counts.png
plots/stacked_barplot_counts_year.png
plots/stacked_barplot_percent.png
plots/stacked_barplot_posterior_count_year.png
plots/stacked_barplot_posterior_counts.png
plots/stacked_barplot_posterior_percent.png
plots/tornado_plots.png
scripts/BUG_forest_plots.R
scripts/PSA boxplots_means.R
scripts/PSA boxplots_totals.R
scripts/PSA_boot_main.R
scripts/birmingham_eda.R
scripts/bootstrap_raw_data.R
scripts/clean_raw_data.R
scripts/costs_with_BUGS.R
scripts/create_boot_PSA_data.R
scripts/dsa_costs.R
scripts/jitter_plots_cost_per_person.R
scripts/jitter_plots_cost_per_person2.R
scripts/model_data.R
scripts/paper main boot tables.R
scripts/paper_main_BUGS_tables.R
scripts/plot-cascade.R
scripts/posterior_barplots.R
scripts/rearrange_birm_data_for scenario_analysis.R
tb.outbreak.costing.Rproj
tests/testthat.R
tests/testthat/test-create_PSA.R
tests/testthat/test-total_year_cost.R
