API for natsuhiko/GASPACHO
GAuSsian Processes for Association mapping leveraging Cell HeterOgeneity
| Global functions | |
|---|---|
| BFGS | Source code |
| BlockProduct | Source code |
| BlockProduct2 | Source code |
| Cbind | Source code |
| Collapse | Source code |
| Eigen | Source code |
| Eigen_cblas | Source code |
| GPLVM | Source code |
| LBFGS | Source code |
| LBFGS_old | Source code |
| Rep | Source code |
| RunDE | Source code |
| Solve | Source code |
| cprod | Source code |
| dbind | Source code |
| dbind0 | Source code |
| deCC | Source code |
| deGbyCC | Source code |
| emn | Source code |
| getB | Source code |
| getB1 | Source code |
| getBF | Source code |
| getC | Source code |
| getC1 | Source code |
| getCC | Source code |
| getH0 | Source code |
| getH1 | Source code |
| getH2 | Source code |
| getKmm | Source code |
| getKnm | Source code |
| getNewSigma | Source code |
| getTLBrho | Source code |
| getTa | Source code |
| initDelta | Source code |
| logDet | Source code |
| logDetChol | Source code |
| mvnMix | Source code Source code |
| mvnMix2 | Source code Source code |
| reduceDim1 | Source code |
| reduceDimAll | Source code |
| reducedDim | Source code |
| updateAlpha | Source code |
| updateDelta | Source code |
| updateDeltaLinear | Source code |
| updateDeltaSE | Source code |
| updateDxCSE | Source code |
| updateKernel | Source code |
| updateKernelAdditive | Source code |
| updateKernelLinear | Source code |
| updateKernelMultiplicative | Source code |
| updateKernelPeriodic | Source code |
| updateKernelSE | Source code |
| updateKernelSE1 | Source code |
| updateKernelSE2 | Source code |
| updateOmega | Source code |
| updateRhoXiTa | Source code |
| updateRhoXiTaSE | Source code |
| updateSigma | Source code |
| updateTLB | Source code |
| updateTLBLinear | Source code |
| updateTLBSE | Source code |
| updateXiLinear | Source code |
| updateYMat | Source code |
| updateYMatOmega | Source code |
| updateYMatSigma | Source code |
