API for nbroguiere/burgertools
Collection of tools extending the functionality of Seurat
| Global functions | |
|---|---|
| $,genotype-method | Man page |
| $<-,genotype-method | Man page |
| .DollarNames.genotype | Source code |
| AnnotateWithTCGA | Man page Source code |
| AnnotateWithVEP | Man page Source code |
| AnnotatedVariableFeaturePlot | Man page Source code |
| CellSimilarityToGenotypes | Man page Source code |
| Classify | Man page Source code |
| ClassifyManual | Man page Source code |
| ComputeMitoContent | Man page Source code |
| CreateGenotypeObject | Man page Source code |
| CrossImpute | Man page Source code |
| Export10X | Man page Source code |
| ExportGenotype | Man page Source code |
| FindDifferentVariants | Man page Source code |
| FindInformativeVariants | Man page Source code |
| FractionDifferingVariants | Man page Source code |
| GatherFeatures | Man page Source code |
| GenerateGates | Man page Source code |
| GenotypeObject | Man page |
| GenotypeSimilarityHeatmap | Man page Source code |
| GetAllSignatureGenes | Man page Source code |
| IdentPlotQC | Man page Source code |
| Import10X | Man page Source code |
| Impute | Man page Source code |
| InformativeVariantPlot | Man page Source code |
| NormalizeHTO | Man page Source code |
| PrefilterVartrix | Man page Source code |
| PseudoBulkGenotypes | Man page Source code |
| ReadSignatures | Man page Source code |
| ReadTCGA | Man page Source code |
| ReadVEP | Man page Source code |
| ReadVartrix | Man page Source code |
| ReadVcf | Man page Source code |
| RunMDS | Man page Source code |
| RunQC | Man page Source code |
| ScoreSignature | Man page Source code |
| ScoreSignatures | Man page Source code |
| SeuratAddVariants | Man page Source code |
| SignaturePlotQC | Man page Source code |
| SignatureScatterPlot | Man page Source code |
| TagCells | Man page Source code |
| VariantPlot | Man page Source code |
| WriteSignatures | Man page Source code |
| [,genotype,ANY,ANY,ANY-method | Man page |
| [<-,genotype,ANY,ANY,ANY-method | Man page |
| [[,genotype,ANY,ANY-method | Man page |
| colSums,genotype-method | Man page |
| colnames,genotype-method | Man page |
| colnames<-,genotype-method | Man page |
| dim,genotype-method | Man page |
| genotype-class | Man page |
| ncol,genotype-method | Man page |
| nrow,genotype-method | Man page |
| rowSums,genotype-method | Man page |
| rownames,genotype-method | Man page |
| rownames<-,genotype-method | Man page |
| show,genotype-method | Man page |
