Files in nbroguiere/burgertools

Collection of tools extending the functionality of Seurat

LICENSE.md R/AnnotateWithTCGA.R R/AnnotateWithVEP.R R/AnnotatedVariableFeaturePlot.R R/CellSimilarityToGenotypes.R R/Classify.R R/ClassifyManual.R R/ComputeMitoContent.R R/CreateGenotypeObject.R R/CrossImpute.R R/Export10X.R R/ExportGenotype.R R/FindDifferentVariants.R R/FindInformativeVariants.R R/FractionDifferingVariants.R R/GatherFeatures.R R/GenerateGates.R R/GenotypeObject.R R/GenotypeSimilarityHeatmap.R R/GetAllSignatureGenes.R R/IdentPlotQC.R R/Import10X.R R/Impute.R R/InformativeVariantPlot.R R/NormalizeHTO.R R/PrefilterVartrix.R R/PseudoBulkGenotypes.R R/ReadSignatures.R R/ReadTCGA.R R/ReadVartrix.R R/ReadVcf.R R/ReadVep.R R/RunMDS.R R/RunQC.R R/ScoreSignature.R R/SeuratAddVariants.R R/SignaturePlotQC.R R/SignatureScatterPlot.R R/TagCells.R R/VariantPlot.R R/WriteSignatures.R README.md man/AnnotateWithTCGA.Rd man/AnnotateWithVEP.Rd man/AnnotatedVariableFeaturePlot.Rd man/CellSimilarityToGenotypes.Rd man/Classify.Rd man/ClassifyManual.Rd man/ComputeMitoContent.Rd man/CreateGenotypeObject.Rd man/CrossImpute.Rd man/Export10X.Rd man/ExportGenotype.Rd man/FindDifferentVariants.Rd man/FindInformativeVariants.Rd man/FractionDifferingVariants.Rd man/GatherFeatures.Rd man/GenerateGates.Rd man/GenotypeSimilarityHeatmap.Rd man/GetAllSignatureGenes.Rd man/IdentPlotQC.Rd man/Import10X.Rd man/Impute.Rd man/InformativeVariantPlot.Rd man/NormalizeHTO.Rd man/PrefilterVartrix.Rd man/PseudoBulkGenotypes.Rd man/ReadSignatures.Rd man/ReadTCGA.Rd man/ReadVEP.Rd man/ReadVartrix.Rd man/ReadVcf.Rd man/RunMDS.Rd man/RunQC.Rd man/ScoreSignature.Rd man/ScoreSignatures.Rd man/SeuratAddVariants.Rd man/SignaturePlotQC.Rd man/SignatureScatterPlot.Rd man/TagCells.Rd man/VariantPlot.Rd man/WriteSignatures.Rd man/genotype-class.Rd