Files in neurogenomics/EpiPrepare
Preprocess epigenomic data for downstream analysis
.Rbuildignore
.github/.gitignore
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/feature_request.md
.github/workflows/check-bioc-docker.yml
.gitignore
DESCRIPTION
Dockerfile
NAMESPACE
NEWS.md
R/bowtie2.R
R/conda_setenv.R
R/fastqc.R
R/fastqc_check_existing.R
R/find_bin_package.R
R/gather_files.R
R/igenomes_manifest.R
R/igenomes_search.R
R/import_narrowPeak.R
R/is_32bit.R
R/make_design_file.R
R/make_sample_dict.R
R/message_parallel.r
R/messager.R
R/refgenie_listr.R
R/refgenie_pull.R
R/refgenie_seekr.R
R/refgenie_setup.R
R/rename_files.R
R/source_all.R
R/stopper.R
R/trimgalore.R
README.Rmd
README.md
inst/CITATION
inst/code/scripts.Rmd
inst/hex/brain2.png
inst/hex/gene1.png
inst/hex/hex.png
inst/hex/hexSticker.Rmd
man/bowtie2.Rd
man/fastqc.Rd
man/igenomes_search.Rd
man/import_narrowPeak.Rd
man/is_32bit.Rd
man/make_design_files.Rd
man/message_parallel.Rd
man/messager.Rd
man/source_all.Rd
man/stopper.Rd
man/trimgalore.Rd
tests/testthat.R
tests/testthat/test-messager.R
tests/testthat/test-source_all.R
tests/testthat/test-stopper.R
vignettes/EpiPrepare.Rmd
vignettes/docker.Rmd
