Man pages for nghiavtr/ISOP
Isoform-Level Expression Patterns in Single-cell RNA-sequencing Data
| assignCellComp | Cluster cells to components based on their proximities to the... |
| detectPatternType | Detect a type of pattern for each pair |
| detectSide | Detect sides of models |
| doGaussianMixtureModel | Do Gaussian mixture modelling for isoform expression... |
| doMixtureModelGene | Do mixture modelling for all pairs of isoforms of the same... |
| doMixtureModelIsoformPair | Do mixture modelling for two isoforms |
| doMixtureModelMatrix | Run mixture models for a data matrix of isoform expression |
| getDPIP | Compute differential patterns of isoform pairs from X2 test... |
| isoformDataSample | A sample of read-count expression isoform dataset |
| ISOP-package | Isoform-level Expression Patterns in Single-cell... |
| plotHistModels | Plot the model of an isoform pair |
| plotPairFeatures | Plot two isoforms by pair lines |
| validateIsoformPair | Validate the randomness of isoform pair via permutation |
