Files in nickmckay/lipdR
LiPD utilities for R
.DS_Store
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/.DS_Store
R/.gitignore
R/QCstandardization.R
R/Untitled.R
R/cbind_NA.R
R/changelog.R
R/csvs.R
R/data.R
R/directory.R
R/globals.R
R/helper.R
R/inCompilation.R
R/init.R
R/is_blank.R
R/jsons.R
R/jsons_add_table.R
R/jsons_idx_to_name.R
R/jsons_idx_to_num.R
R/jsons_merge.R
R/jsons_split_csv.R
R/lipd.R
R/lipd2neotoma.R
R/lipdManipulation.R
R/misc.R
R/neotoma2lipd.R
R/pastSKOS.R
R/queryLipdverse.R
R/query_wiki.r
R/s3.R
R/summary.R
R/sysdata.rda
R/tabulate.R
R/tidy2.R
R/timeseries.R
R/timeseries_collapse.R
R/timeseries_extract.R
R/treeTs.R
R/validation.R
R/versions.R
R/zips.R
R/zzz.R
README.md
codecov.yml
data-raw/DATASET.R
data-raw/DESCRIPTION.dcf
data-raw/docs/404.html
data-raw/docs/LICENSE-text.html
data-raw/docs/LICENSE.html
data-raw/docs/articles/createColumn.html
data-raw/docs/articles/index.html
data-raw/docs/authors.html
data-raw/docs/bootstrap-toc.css
data-raw/docs/bootstrap-toc.js
data-raw/docs/docsearch.css
data-raw/docs/docsearch.js
data-raw/docs/index.html
data-raw/docs/link.svg
data-raw/docs/news/index.html
data-raw/docs/pkgdown.css
data-raw/docs/pkgdown.js
data-raw/docs/pkgdown.yml
data-raw/docs/reference/Rplot001.png
data-raw/docs/reference/addTSidToLipd.html
data-raw/docs/reference/add_created_by.html
data-raw/docs/reference/as.lipd.html
data-raw/docs/reference/as.lipdTs.html
data-raw/docs/reference/as.lipdTsTibble.html
data-raw/docs/reference/as.lipdTsTibbleLong.html
data-raw/docs/reference/as.multiLipd.html
data-raw/docs/reference/ask_how_many.html
data-raw/docs/reference/bagit.html
data-raw/docs/reference/browse_dialog.html
data-raw/docs/reference/build_structure.html
data-raw/docs/reference/check_match.html
data-raw/docs/reference/clean_csv.html
data-raw/docs/reference/collapseTs.html
data-raw/docs/reference/collapse_block.html
data-raw/docs/reference/collapse_block_indexed.html
data-raw/docs/reference/collapse_column.html
data-raw/docs/reference/collapse_table.html
data-raw/docs/reference/collapse_table_root.html
data-raw/docs/reference/combineInterpretationByScope.html
data-raw/docs/reference/createColumn.html
data-raw/docs/reference/createTSid.html
data-raw/docs/reference/create_range.html
data-raw/docs/reference/create_tmp_dir.html
data-raw/docs/reference/download_from_url.html
data-raw/docs/reference/duplicateTable.html
data-raw/docs/reference/export_model.html
data-raw/docs/reference/export_section.html
data-raw/docs/reference/extractTs.html
data-raw/docs/reference/fake_bagit.html
data-raw/docs/reference/filterTs.html
data-raw/docs/reference/find_data_dir.html
data-raw/docs/reference/fix_doi.html
data-raw/docs/reference/getChronDataNeotoma2.html
data-raw/docs/reference/getGeoNeotoma2.html
data-raw/docs/reference/getMeasurementTables.html
data-raw/docs/reference/getPaleoDataNeotoma2.html
data-raw/docs/reference/getPubNeotoma2.html
data-raw/docs/reference/get_csv_from_columns.html
data-raw/docs/reference/get_csv_from_metadata.html
data-raw/docs/reference/get_csv_from_model.html
data-raw/docs/reference/get_csv_from_section.html
data-raw/docs/reference/get_csv_from_table.html
data-raw/docs/reference/get_datasetname.html
data-raw/docs/reference/get_download_path.html
data-raw/docs/reference/get_lipd_paths.html
data-raw/docs/reference/get_lipd_version.html
data-raw/docs/reference/get_matches.html
data-raw/docs/reference/get_os.html
data-raw/docs/reference/get_src_or_dst.html
data-raw/docs/reference/get_table.html
data-raw/docs/reference/get_ts_lipd.html
data-raw/docs/reference/get_vn.html
data-raw/docs/reference/hasData.html
data-raw/docs/reference/idx_col_by_name.html
data-raw/docs/reference/idx_col_by_num.html
data-raw/docs/reference/idx_name_to_num.html
data-raw/docs/reference/idx_num_to_name.html
data-raw/docs/reference/idx_table_by_name.html
data-raw/docs/reference/idx_table_by_num.html
data-raw/docs/reference/import_model.html
data-raw/docs/reference/import_section.html
data-raw/docs/reference/index.html
data-raw/docs/reference/index_geo.html
data-raw/docs/reference/is.lipd.html
data-raw/docs/reference/is.lipdTs.html
data-raw/docs/reference/is.lipdTsTibble.html
data-raw/docs/reference/is.lipdTsTibbleLong.html
data-raw/docs/reference/is.multiLipd.html
data-raw/docs/reference/is.url.html
data-raw/docs/reference/isDirectory.html
data-raw/docs/reference/isNullOb.html
data-raw/docs/reference/lipd_read.html
data-raw/docs/reference/lipd_write.html
data-raw/docs/reference/list_files_recursive.html
data-raw/docs/reference/lumpTsMetaVariables.html
data-raw/docs/reference/merge_csv_columns.html
data-raw/docs/reference/merge_csv_metadata.html
data-raw/docs/reference/merge_csv_model.html
data-raw/docs/reference/merge_csv_section.html
data-raw/docs/reference/merge_csv_table.html
data-raw/docs/reference/merge_interpretations.html
data-raw/docs/reference/neotoma2lipd.html
data-raw/docs/reference/process_expression.html
data-raw/docs/reference/pullTsVariable.html
data-raw/docs/reference/pushTsVariable.html
data-raw/docs/reference/put_base_data.html
data-raw/docs/reference/put_table.html
data-raw/docs/reference/queryTs.html
data-raw/docs/reference/readLipd.html
data-raw/docs/reference/read_csv_from_file.html
data-raw/docs/reference/read_jsonld.html
data-raw/docs/reference/remove_names_from_lists.html
data-raw/docs/reference/replace_invalid_chars.html
data-raw/docs/reference/rm_empty_fields.html
data-raw/docs/reference/rm_existing_tables.html
data-raw/docs/reference/set_bagit.html
data-raw/docs/reference/splitInterpretationByScope.html
data-raw/docs/reference/stripExtension.html
data-raw/docs/reference/swapGeoCoordinates.html
data-raw/docs/reference/tabulateTs.html
data-raw/docs/reference/tidyTs.html
data-raw/docs/reference/tidyTsOld.html
data-raw/docs/reference/ts2tibble.html
data-raw/docs/reference/tsPluck.html
data-raw/docs/reference/unindex_geo.html
data-raw/docs/reference/untidyTs.html
data-raw/docs/reference/unzipper.html
data-raw/docs/reference/update_lipd_v1_1.html
data-raw/docs/reference/update_lipd_v1_2.html
data-raw/docs/reference/update_lipd_v1_2_section.html
data-raw/docs/reference/update_lipd_v1_3.html
data-raw/docs/reference/update_lipd_v1_3_keys.html
data-raw/docs/reference/update_lipd_v1_3_structure.html
data-raw/docs/reference/update_lipd_version.html
data-raw/docs/reference/warn_ensembles_in_paleo.html
data-raw/docs/reference/writeLipd.html
data-raw/docs/reference/write_csv_to_file.html
data-raw/docs/reference/zipper.html
data-raw/docs/sitemap.xml
data-raw/log
data/cconv.rda
data/nc.rda
data/past.rda
lipd2neotomaDemo.Rmd
lipd2neotomaDemo.html
lipdKeystandardization.html
lipdKeystandardization_files/MathJax.js.download
lipdR.Rproj
man/addTSidToLipd.Rd
man/add_created_by.Rd
man/as.lipd.Rd
man/as.lipdTs.Rd
man/as.lipdTsTibble.Rd
man/as.lipdTsTibbleLong.Rd
man/as.multiLipd.Rd
man/ask_how_many.Rd
man/browse_dialog.Rd
man/build_structure.Rd
man/cbind.NA.Rd
man/cconv.Rd
man/checkZipMd5.Rd
man/check_match.Rd
man/clean_csv.Rd
man/collapseTs.Rd
man/collapse_block.Rd
man/collapse_block_indexed.Rd
man/collapse_column.Rd
man/collapse_table.Rd
man/collapse_table_root.Rd
man/combineInterpretationByScope.Rd
man/convert_dsid_to_path.Rd
man/createChangelog.Rd
man/createColumn.Rd
man/createDatasetId.Rd
man/createMarkdownChangelog.Rd
man/createTSid.Rd
man/create_range.Rd
man/create_tmp_dir.Rd
man/download_from_url.Rd
man/duplicateTable.Rd
man/export_model.Rd
man/export_section.Rd
man/extractTs.Rd
man/filterTs.Rd
man/find_data_dir.Rd
man/fix_doi.Rd
man/formatCitation.Rd
man/getChangelog.Rd
man/getChronDataNeotoma2.Rd
man/getGeoNeotoma2.Rd
man/getMeasurementTables.Rd
man/getPaleoDataNeotoma2.Rd
man/getPubNeotoma2.Rd
man/getQueryTable.Rd
man/getTimestamp.Rd
man/getVersion.Rd
man/get_csv_from_columns.Rd
man/get_csv_from_metadata.Rd
man/get_csv_from_model.Rd
man/get_csv_from_section.Rd
man/get_csv_from_table.Rd
man/get_datasetname.Rd
man/get_download_path.Rd
man/get_lipd_paths.Rd
man/get_lipd_version.Rd
man/get_matches.Rd
man/get_os.Rd
man/get_src_or_dst.Rd
man/get_table.Rd
man/get_ts_lipd.Rd
man/get_vn.Rd
man/hasData.Rd
man/idx_col_by_name.Rd
man/idx_col_by_num.Rd
man/idx_name_to_num.Rd
man/idx_num_to_name.Rd
man/idx_table_by_name.Rd
man/idx_table_by_num.Rd
man/import_model.Rd
man/import_section.Rd
man/index_geo.Rd
man/initializeChangelog.Rd
man/is.lipd.Rd
man/is.lipdTs.Rd
man/is.lipdTsTibble.Rd
man/is.lipdTsTibbleLong.Rd
man/is.multiLipd.Rd
man/is.url.Rd
man/isDirectory.Rd
man/isNullOb.Rd
man/lipd2neotoma.Rd
man/lipdSummary.Rd
man/lipdTSSummary.Rd
man/lipd_read.Rd
man/lipd_write.Rd
man/list_files_recursive.Rd
man/lumpTsMetaVariables.Rd
man/matchCols.Rd
man/merge_csv_columns.Rd
man/merge_csv_metadata.Rd
man/merge_csv_model.Rd
man/merge_csv_section.Rd
man/merge_csv_table.Rd
man/merge_interpretations.Rd
man/multiLipdSummary.Rd
man/nc.Rd
man/neotoma2lipd.Rd
man/newQueryTable.Rd
man/past.Rd
man/print.lipd.Rd
man/print.lipd_ts.Rd
man/print.lipd_ts_tibble.Rd
man/print.multi_lipd.Rd
man/printCitations.Rd
man/printModel.Rd
man/printSummaryData.Rd
man/process_expression.Rd
man/pullTsVariable.Rd
man/pushTsVariable.Rd
man/put_base_data.Rd
man/put_table.Rd
man/queryLipdverse.Rd
man/queryTs.Rd
man/readLipd.Rd
man/read_csv_from_file.Rd
man/read_jsonld.Rd
man/removeEnsembles.Rd
man/remove_names_from_lists.Rd
man/replaceLocalZipMD5.Rd
man/replace_invalid_chars.Rd
man/rm_empty_fields.Rd
man/rm_existing_tables.Rd
man/splitInterpretationByScope.Rd
man/standardizeQCsheetValues.Rd
man/stripExtension.Rd
man/summary.lipd.Rd
man/summary.lipd_ts.Rd
man/summary.lipd_ts_tibble.Rd
man/summary.multi_lipd.Rd
man/swapGeoCoordinates.Rd
man/tabulateTs.Rd
man/tidyTs.Rd
man/tidyTsOld.Rd
man/ts2tibble.Rd
man/tsPluck.Rd
man/unindex_geo.Rd
man/untidyTs.Rd
man/unzipper.Rd
man/updateChangelog.Rd
man/updateQueryTable.Rd
man/update_lipd_v1_1.Rd
man/update_lipd_v1_2.Rd
man/update_lipd_v1_2_section.Rd
man/update_lipd_v1_3.Rd
man/update_lipd_v1_3_keys.Rd
man/update_lipd_v1_3_structure.Rd
man/update_lipd_version.Rd
man/validLipd.Rd
man/warn_ensembles_in_paleo.Rd
man/writeLipd.Rd
man/writeVersionToRoot.Rd
man/write_csv_to_file.Rd
man/zipper.Rd
standardizeKeys.Rmd
tests/testthat.R
tests/testthat/Carre.Saloum.2018.lpd
tests/testthat/ODP1098B13.lpd
tests/testthat/log
tests/testthat/test_lipdr.R
vignettes/.gitignore
vignettes/Query.Rmd
vignettes/Summary.Rmd
vignettes/lipd2neotoma.Rmd
