Files in ohdsi-studies/Corazon
A Package Skeleton for Comparative Effectiveness Studies
DESCRIPTION
HydraConfig.json
R/CohortMethod.R
R/CreateAllCohorts.R
R/CreateCohorts.R
R/Export.R
R/Main.R
R/Package.R
R/ShinyApps.R
R/SubmitResults.R
R/SynthesizePositiveControls.R
README.md
corazon.Rproj
documents/OHDSI Protocol CORAZON V2.1_clean.docx
documents/README.md
documents/conceptsets_corazon.xlsx
extras/CodeToRun.R
extras/CreateStudyAnalysisDetails.R
extras/PackageMaintenance.R
extras/README.md
inst/cohorts/Allcause_mortality.json
inst/cohorts/Apixaban.json
inst/cohorts/Apixaban__80_yo_subgroup.json
inst/cohorts/Apixaban__CKD_subgroup.json
inst/cohorts/Apixaban__reduced_dose.json
inst/cohorts/Apixaban__standard_dose.json
inst/cohorts/DOACAllcause_mortality.json
inst/cohorts/DOACApixaban__80_yo_subgroup.json
inst/cohorts/DOACApixaban__CKD_subgroup.json
inst/cohorts/DOACApixaban__ontreatment.json
inst/cohorts/DOACApixaban__ontreatment__reduced_dose.json
inst/cohorts/DOACApixaban__ontreatment__standard_dose.json
inst/cohorts/DOACDabigatran__80_yo_subgroup.json
inst/cohorts/DOACDabigatran__CKD_subgroup.json
inst/cohorts/DOACDabigatran__ontreatment.json
inst/cohorts/DOACDabigatran__ontreatment__reduced_dose.json
inst/cohorts/DOACDabigatran__ontreatment__standard_dose.json
inst/cohorts/DOACEdoxaban__80_yo_subgroup.json
inst/cohorts/DOACEdoxaban__CKD_subgroup.json
inst/cohorts/DOACEdoxaban__ontreatment.json
inst/cohorts/DOACEdoxaban_ontreatment__reduced_dose.json
inst/cohorts/DOACEdoxaban_ontreatment__standard_dose.json
inst/cohorts/DOACGastrointestinal_bleeding.json
inst/cohorts/DOACIntracranial_hemorrhage.json
inst/cohorts/DOACIschemic_stroke_and_systemic_embolism.json
inst/cohorts/DOACRivaroxaban__80_yo_subgroup.json
inst/cohorts/DOACRivaroxaban__CKD_subgroup.json
inst/cohorts/DOACRivaroxaban__ontreatment.json
inst/cohorts/DOACRivaroxaban__ontreatment__reduced_dose.json
inst/cohorts/DOACRivaroxaban__ontreatment__standard_dose.json
inst/cohorts/Dabigatran.json
inst/cohorts/Dabigatran__80_yo_subgroup.json
inst/cohorts/Dabigatran__CKD_subgroup.json
inst/cohorts/Dabigatran__reduced_dose.json
inst/cohorts/Dabigatran__standard_dose.json
inst/cohorts/Edoxaban.json
inst/cohorts/Edoxaban__80_yo_subgroup.json
inst/cohorts/Edoxaban__CKD_subgroup.json
inst/cohorts/Edoxaban__reduced_dose.json
inst/cohorts/Edoxaban__standard_dose.json
inst/cohorts/Gastrointestinal_bleeding.json
inst/cohorts/Intracranial_hemorrhage.json
inst/cohorts/Ischemic_stroke_and_systemic_embolism.json
inst/cohorts/Rivaroxaban.json
inst/cohorts/Rivaroxaban__80_yo_subgroup.json
inst/cohorts/Rivaroxaban__CKD_subgroup.json
inst/cohorts/Rivaroxaban__reduced_dose.json
inst/cohorts/Rivaroxaban__standard_dose.json
inst/settings/CohortsToCreate.csv
inst/settings/NegativeControls.csv
inst/settings/StudySpecification.json
inst/settings/TcosOfInterest.csv
inst/settings/cmAnalysisList.json
inst/shiny/EvidenceExplorer/DataPulls.R
inst/shiny/EvidenceExplorer/EvidenceExplorer.Rproj
inst/shiny/EvidenceExplorer/PlotsAndTables.R
inst/shiny/EvidenceExplorer/Table1Specs.csv
inst/shiny/EvidenceExplorer/global.R
inst/shiny/EvidenceExplorer/server.R
inst/shiny/EvidenceExplorer/ui.R
inst/sql/sql_server/Allcause_mortality.sql
inst/sql/sql_server/Apixaban.sql
inst/sql/sql_server/Apixaban__80_yo_subgroup.sql
inst/sql/sql_server/Apixaban__CKD_subgroup.sql
inst/sql/sql_server/Apixaban__reduced_dose.sql
inst/sql/sql_server/Apixaban__standard_dose.sql
inst/sql/sql_server/CreateCohortTable.sql
inst/sql/sql_server/DOACAllcause_mortality.sql
inst/sql/sql_server/DOACApixaban__80_yo_subgroup.sql
inst/sql/sql_server/DOACApixaban__CKD_subgroup.sql
inst/sql/sql_server/DOACApixaban__ontreatment.sql
inst/sql/sql_server/DOACApixaban__ontreatment__reduced_dose.sql
inst/sql/sql_server/DOACApixaban__ontreatment__standard_dose.sql
inst/sql/sql_server/DOACDabigatran__80_yo_subgroup.sql
inst/sql/sql_server/DOACDabigatran__CKD_subgroup.sql
inst/sql/sql_server/DOACDabigatran__ontreatment.sql
inst/sql/sql_server/DOACDabigatran__ontreatment__reduced_dose.sql
inst/sql/sql_server/DOACDabigatran__ontreatment__standard_dose.sql
inst/sql/sql_server/DOACEdoxaban__80_yo_subgroup.sql
inst/sql/sql_server/DOACEdoxaban__CKD_subgroup.sql
inst/sql/sql_server/DOACEdoxaban__ontreatment.sql
inst/sql/sql_server/DOACEdoxaban_ontreatment__reduced_dose.sql
inst/sql/sql_server/DOACEdoxaban_ontreatment__standard_dose.sql
inst/sql/sql_server/DOACGastrointestinal_bleeding.sql
inst/sql/sql_server/DOACIntracranial_hemorrhage.sql
inst/sql/sql_server/DOACIschemic_stroke_and_systemic_embolism.sql
inst/sql/sql_server/DOACRivaroxaban__80_yo_subgroup.sql
inst/sql/sql_server/DOACRivaroxaban__CKD_subgroup.sql
inst/sql/sql_server/DOACRivaroxaban__ontreatment.sql
inst/sql/sql_server/DOACRivaroxaban__ontreatment__reduced_dose.sql
inst/sql/sql_server/DOACRivaroxaban__ontreatment__standard_dose.sql
inst/sql/sql_server/Dabigatran.sql
inst/sql/sql_server/Dabigatran__80_yo_subgroup.sql
inst/sql/sql_server/Dabigatran__CKD_subgroup.sql
inst/sql/sql_server/Dabigatran__reduced_dose.sql
inst/sql/sql_server/Dabigatran__standard_dose.sql
inst/sql/sql_server/Edoxaban.sql
inst/sql/sql_server/Edoxaban__80_yo_subgroup.sql
inst/sql/sql_server/Edoxaban__CKD_subgroup.sql
inst/sql/sql_server/Edoxaban__reduced_dose.sql
inst/sql/sql_server/Edoxaban__standard_dose.sql
inst/sql/sql_server/Gastrointestinal_bleeding.sql
inst/sql/sql_server/GetCounts.sql
inst/sql/sql_server/Intracranial_hemorrhage.sql
inst/sql/sql_server/Ischemic_stroke_and_systemic_embolism.sql
inst/sql/sql_server/NegativeControlOutcomes.sql
inst/sql/sql_server/Rivaroxaban.sql
inst/sql/sql_server/Rivaroxaban__80_yo_subgroup.sql
inst/sql/sql_server/Rivaroxaban__CKD_subgroup.sql
inst/sql/sql_server/Rivaroxaban__reduced_dose.sql
inst/sql/sql_server/Rivaroxaban__standard_dose.sql
man/SkeletonComparativeEffectStudy-package.Rd
man/createCohorts.Rd
man/execute.Rd
man/exportResults.Rd
man/launchEvidenceExplorer.Rd
man/prepareForEvidenceExplorer.Rd
man/runCohortMethod.Rd
man/synthesizePositiveControls.Rd
man/uploadResults.Rd
readme.md
studyReadme.md
vignettes/DataModel.Rmd
vignettes/DataModel.png
vignettes/DataModel.pptx
vignettes/UsingSkeletonPackage.Rmd
