ohdsi-studies/Covid19EstimationHydroxychloroquine
A Package Skeleton for Comparative Effectiveness Studies

Package index
Search the ohdsi-studies/Covid19EstimationHydroxychloroquine package
Vignettes
Functions
47
Source code
32
Man pages
10
Home
/
GitHub
/
ohdsi-studies/Covid19EstimationHydroxychloroquine: A Package Skeleton for Comparative Effectiveness Studies
/
Files

Files in ohdsi-studies/Covid19EstimationHydroxychloroquine
A Package Skeleton for Comparative Effectiveness Studies

.Rbuildignore
.Rprofile
.gitignore
Covid19EstimationHydroxychloroquine.Rproj
Covid19HcqSccs/.Rbuildignore
Covid19HcqSccs/.gitignore
Covid19HcqSccs/Covid19HcqSccs.Rproj
Covid19HcqSccs/DESCRIPTION
Covid19HcqSccs/NAMESPACE
Covid19HcqSccs/R/Covid19HcqSccs.R Covid19HcqSccs/R/CreateAllCohorts.R Covid19HcqSccs/R/CreateCohorts.R Covid19HcqSccs/R/Main.R Covid19HcqSccs/R/SelfControlledCaseSeries.R Covid19HcqSccs/README.md
Covid19HcqSccs/errorReportR.txt
Covid19HcqSccs/extras/CodeToRun.R Covid19HcqSccs/extras/Covid19HcqSccs.pdf Covid19HcqSccs/extras/CreateAnalysisSettings.R Covid19HcqSccs/extras/ForProtocol.R Covid19HcqSccs/extras/InstallPackages.R
Covid19HcqSccs/extras/NegativeControlsPerExposureGroup.csv
Covid19HcqSccs/extras/OutcomesOfInterest.csv
Covid19HcqSccs/extras/PackageMaintenance.R Covid19HcqSccs/extras/README.md
Covid19HcqSccs/extras/SccsExposureGroups.csv
Covid19HcqSccs/inst/cohorts/Hydroxychloroquine.json
Covid19HcqSccs/inst/cohorts/acuteMyocardialInfarction.json
Covid19HcqSccs/inst/cohorts/acutePancreatitis.json
Covid19HcqSccs/inst/cohorts/acuteRenalFailure.json
Covid19HcqSccs/inst/cohorts/angioedema.json
Covid19HcqSccs/inst/cohorts/bradycardia.json
Covid19HcqSccs/inst/cohorts/cardiacArrhythmia.json
Covid19HcqSccs/inst/cohorts/chestPainOrAngina.json
Covid19HcqSccs/inst/cohorts/endStageRenalDisease.json
Covid19HcqSccs/inst/cohorts/episodesOfAcuteRespiratoryDistress.json
Covid19HcqSccs/inst/cohorts/gastrointestinalBleeding.json
Covid19HcqSccs/inst/cohorts/heartFailure.json
Covid19HcqSccs/inst/cohorts/hepaticFailure.json
Covid19HcqSccs/inst/cohorts/hospitalizationsWithPneumonia.json
Covid19HcqSccs/inst/cohorts/stroke.json
Covid19HcqSccs/inst/cohorts/totalCardiovascularDiseaseEvents.json
Covid19HcqSccs/inst/cohorts/transientIschemicAttack.json
Covid19HcqSccs/inst/cohorts/venousThromboembolicEvents.json
Covid19HcqSccs/inst/settings/CohortsToCreate.csv
Covid19HcqSccs/inst/settings/CohortsToCreateCovidAtlas.csv
Covid19HcqSccs/inst/settings/CohortsToCreateJnJAtlas.csv
Covid19HcqSccs/inst/settings/NegativeControls.csv
Covid19HcqSccs/inst/settings/rEnvironmentSnapshot.csv
Covid19HcqSccs/inst/settings/sccsAnalysisList.json
Covid19HcqSccs/inst/settings/tosOfInterest.csv
Covid19HcqSccs/inst/sql/sql_server/CreateAtRiskCohorts.sql
Covid19HcqSccs/inst/sql/sql_server/CreateCohortTable.sql
Covid19HcqSccs/inst/sql/sql_server/GetCounts.sql
Covid19HcqSccs/inst/sql/sql_server/Hydroxychloroquine.sql
Covid19HcqSccs/inst/sql/sql_server/NegativeControlOutcomes.sql
Covid19HcqSccs/inst/sql/sql_server/acuteMyocardialInfarction.sql
Covid19HcqSccs/inst/sql/sql_server/acutePancreatitis.sql
Covid19HcqSccs/inst/sql/sql_server/acuteRenalFailure.sql
Covid19HcqSccs/inst/sql/sql_server/angioedema.sql
Covid19HcqSccs/inst/sql/sql_server/bradycardia.sql
Covid19HcqSccs/inst/sql/sql_server/cardiacArrhythmia.sql
Covid19HcqSccs/inst/sql/sql_server/chestPainOrAngina.sql
Covid19HcqSccs/inst/sql/sql_server/endStageRenalDisease.sql
Covid19HcqSccs/inst/sql/sql_server/episodesOfAcuteRespiratoryDistress.sql
Covid19HcqSccs/inst/sql/sql_server/gastrointestinalBleeding.sql
Covid19HcqSccs/inst/sql/sql_server/heartFailure.sql
Covid19HcqSccs/inst/sql/sql_server/hepaticFailure.sql
Covid19HcqSccs/inst/sql/sql_server/hospitalizationsWithPneumonia.sql
Covid19HcqSccs/inst/sql/sql_server/stroke.sql
Covid19HcqSccs/inst/sql/sql_server/totalCardiovascularDiseaseEvents.sql
Covid19HcqSccs/inst/sql/sql_server/transientIschemicAttack.sql
Covid19HcqSccs/inst/sql/sql_server/venousThromboembolicEvents.sql
Covid19HcqSccs/man/Covid19HcqSccs-package.Rd
Covid19HcqSccs/man/createCohorts.Rd Covid19HcqSccs/man/execute.Rd
Covid19HcqSccs/man/runSelfControlledCaseSeries.Rd
DESCRIPTION
HydraConfig.json
NAMESPACE
R/CohortMethod.R R/CreateAllCohorts.R R/CreateCohorts.R R/Diagnostics.R R/Export.R R/Main.R R/MetaAnalysis.R R/Package.R R/PremergeCleanShinyData.R R/RenameDatabaseIds.R R/Sharing.R R/ShinyApps.R R/SynthesizePositiveControls.R README.md documents/OHDSI COVID-19 Studyathon_PLE_HCQ_Protocol_v1.4.pdf documents/README.md extras/CodeToRun.R extras/CodeToRunLocal.R extras/GrabFromSftp.R extras/PackageMaintenance.R extras/README.md
inst/cohorts/LEGEND_HTN_Acute_myocardial_infarction_events.json
inst/cohorts/LEGEND_HTN_Acute_pancreatitis_events.json
inst/cohorts/LEGEND_HTN_Acute_renal_failure_events.json
inst/cohorts/LEGEND_HTN_Allcause_mortality.json
inst/cohorts/LEGEND_HTN_Cardiovascularrelated_mortality.json
inst/cohorts/LEGEND_HTN_Gastrointestinal_bleeding_events.json
inst/cohorts/LEGEND_HTN_Person_with_cardiac_arrhythmia.json
inst/cohorts/LEGEND_HTN_Persons_with_bradycardia.json
inst/cohorts/LEGEND_HTN_Persons_with_chest_pain_or_angina.json
inst/cohorts/LEGEND_HTN_Persons_with_end_stage_renal_disease.json
inst/cohorts/LEGEND_HTN_Persons_with_heart_failure.json
inst/cohorts/LEGEND_HTN_Persons_with_hepatic_failure.json
inst/cohorts/LEGEND_HTN_Stroke_ischemic_or_hemorrhagic_events.json
inst/cohorts/LEGEND_HTN_Total_cardiovascular_disease_events.json
inst/cohorts/LEGEND_HTN_Transient_ischemic_attack_events.json
inst/cohorts/LEGEND_HTN_Venous_thromboembolic_pulmonary_embolism_and_deep_vein_thrombosis_events_.json
inst/cohorts/OHDSICovid19_Hydroxychloroquine__Amoxicillin.json
inst/cohorts/OHDSICovid19_Hydroxychloroquine__Azithromycin.json
inst/cohorts/OHDSI_Cov19_New_users_of_Hydroxychloroquine_with_prior_rheumatoid_arthritis.json
inst/cohorts/OHDSI_Cov19_New_users_of_sulfasazine_with_prior_rheumatoid_arthritis.json
inst/settings/CohortsToCreate.csv
inst/settings/NegativeControls.csv
inst/settings/StudySpecification.json
inst/settings/TcosOfInterest.csv
inst/settings/cmAnalysisList.json
inst/shiny/EvidenceExplorer/DataPulls.R
inst/shiny/EvidenceExplorer/EvidenceExplorer.Rproj
inst/shiny/EvidenceExplorer/PlotsAndTables.R
inst/shiny/EvidenceExplorer/Table1Specs.csv
inst/shiny/EvidenceExplorer/global.R inst/shiny/EvidenceExplorer/server.R inst/shiny/EvidenceExplorer/ui.R
inst/sql/sql_server/CreateCohortTable.sql
inst/sql/sql_server/GetCounts.sql
inst/sql/sql_server/LEGEND_HTN_Acute_myocardial_infarction_events.sql
inst/sql/sql_server/LEGEND_HTN_Acute_pancreatitis_events.sql
inst/sql/sql_server/LEGEND_HTN_Acute_renal_failure_events.sql
inst/sql/sql_server/LEGEND_HTN_Allcause_mortality.sql
inst/sql/sql_server/LEGEND_HTN_Cardiovascularrelated_mortality.sql
inst/sql/sql_server/LEGEND_HTN_Gastrointestinal_bleeding_events.sql
inst/sql/sql_server/LEGEND_HTN_Person_with_cardiac_arrhythmia.sql
inst/sql/sql_server/LEGEND_HTN_Persons_with_bradycardia.sql
inst/sql/sql_server/LEGEND_HTN_Persons_with_chest_pain_or_angina.sql
inst/sql/sql_server/LEGEND_HTN_Persons_with_end_stage_renal_disease.sql
inst/sql/sql_server/LEGEND_HTN_Persons_with_heart_failure.sql
inst/sql/sql_server/LEGEND_HTN_Persons_with_hepatic_failure.sql
inst/sql/sql_server/LEGEND_HTN_Stroke_ischemic_or_hemorrhagic_events.sql
inst/sql/sql_server/LEGEND_HTN_Total_cardiovascular_disease_events.sql
inst/sql/sql_server/LEGEND_HTN_Transient_ischemic_attack_events.sql
inst/sql/sql_server/LEGEND_HTN_Venous_thromboembolic_pulmonary_embolism_and_deep_vein_thrombosis_events_.sql
inst/sql/sql_server/NegativeControlOutcomes.sql
inst/sql/sql_server/OHDSICovid19_Hydroxychloroquine__Amoxicillin.sql
inst/sql/sql_server/OHDSICovid19_Hydroxychloroquine__Azithromycin.sql
inst/sql/sql_server/OHDSI_Cov19_New_users_of_Hydroxychloroquine_with_prior_rheumatoid_arthritis.sql
inst/sql/sql_server/OHDSI_Cov19_New_users_of_sulfasazine_with_prior_rheumatoid_arthritis.sql
man/Covid19EstimationHydroxychloroquine.Rd man/createCohorts.Rd man/execute.Rd man/exportResults.Rd man/generateDiagnostics.Rd man/launchEvidenceExplorer.Rd man/prepareForEvidenceExplorer.Rd man/runCohortMethod.Rd man/synthesizePositiveControls.Rd man/uploadResults.Rd
ohdsi-studies/Covid19EstimationHydroxychloroquine documentation built on Nov. 11, 2020, 12:21 a.m.

R Package Documentation

rdrr.io home R language documentation Run R code online

Browse R Packages

CRAN packages Bioconductor packages R-Forge packages GitHub packages

We want your feedback!

Note that we can't provide technical support on individual packages. You should contact the package authors for that.
GitHub issue tracker
ian@mutexlabs.com
Personal blog

 
Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.

Close