ohdsi-studies/Covid19EstimationIl6JakInhibitors
A Package Skeleton for Comparative Effectiveness Studies

Package index
Search the ohdsi-studies/Covid19EstimationIl6JakInhibitors package
Vignettes
Functions
40
Source code
38
Man pages
10
Home
/
GitHub
/
ohdsi-studies/Covid19EstimationIl6JakInhibitors: A Package Skeleton for Comparative Effectiveness Studies
/
Files

Files in ohdsi-studies/Covid19EstimationIl6JakInhibitors
A Package Skeleton for Comparative Effectiveness Studies

.Rbuildignore
.Rprofile
.gitignore
Covid19EstimationIl6JakInhibitors.Rproj
Covid19Il6JakInhibitorsSccs/.Rbuildignore
Covid19Il6JakInhibitorsSccs/.gitignore
Covid19Il6JakInhibitorsSccs/Covid19Il6JakInhibitorsSccs.Rproj
Covid19Il6JakInhibitorsSccs/DESCRIPTION
Covid19Il6JakInhibitorsSccs/NAMESPACE
Covid19Il6JakInhibitorsSccs/R/Characterization.R Covid19Il6JakInhibitorsSccs/R/Covid19Il6JakInhibitorsSccs.R Covid19Il6JakInhibitorsSccs/R/CreateAllCohorts.R Covid19Il6JakInhibitorsSccs/R/CreateCohorts.R Covid19Il6JakInhibitorsSccs/R/Export.R Covid19Il6JakInhibitorsSccs/R/Fix.R Covid19Il6JakInhibitorsSccs/R/Main.R Covid19Il6JakInhibitorsSccs/R/SelfControlledCaseSeries.R Covid19Il6JakInhibitorsSccs/R/Sharing.R Covid19Il6JakInhibitorsSccs/R/ShinyApps.R Covid19Il6JakInhibitorsSccs/README.md Covid19Il6JakInhibitorsSccs/extras/CodeForRerun.md Covid19Il6JakInhibitorsSccs/extras/CodeToRunDeveloper.R Covid19Il6JakInhibitorsSccs/extras/CodetoRunCoordinatingCenter.R Covid19Il6JakInhibitorsSccs/extras/Covid19Il6JakInhibitorsSccs.pdf Covid19Il6JakInhibitorsSccs/extras/CreateAnalysisSettings.R Covid19Il6JakInhibitorsSccs/extras/ForProtocol.R Covid19Il6JakInhibitorsSccs/extras/InstallPackages.R
Covid19Il6JakInhibitorsSccs/extras/NegativeControlsPerExposureGroup.csv
Covid19Il6JakInhibitorsSccs/extras/OutcomesOfInterest.csv
Covid19Il6JakInhibitorsSccs/extras/PackageMaintenance.R Covid19Il6JakInhibitorsSccs/extras/README.md
Covid19Il6JakInhibitorsSccs/extras/SccsExposureGroups.csv
Covid19Il6JakInhibitorsSccs/inst/cohorts/Adalimumab.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/Tocilizumab.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/acuteMyocardialInfarction.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/acutePancreatitis.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/acuteRenalFailure.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/angioedema.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/bradycardia.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/cardiacArrhythmia.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/chestPainOrAngina.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/endStageRenalDisease.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/gastrointestinalBleeding.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/heartFailure.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/hepaticFailure.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/stroke.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/totalCardiovascularDiseaseEvents.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/transientIschemicAttack.json
Covid19Il6JakInhibitorsSccs/inst/cohorts/venousThromboembolicEvents.json
Covid19Il6JakInhibitorsSccs/inst/settings/CohortsToCreate.csv
Covid19Il6JakInhibitorsSccs/inst/settings/CohortsToCreateCovidAtlas.csv
Covid19Il6JakInhibitorsSccs/inst/settings/CohortsToCreateJnJAtlas.csv
Covid19Il6JakInhibitorsSccs/inst/settings/NegativeControls.csv
Covid19Il6JakInhibitorsSccs/inst/settings/rEnvironmentSnapshot.csv
Covid19Il6JakInhibitorsSccs/inst/settings/sccsAnalysisList.json
Covid19Il6JakInhibitorsSccs/inst/settings/tosOfInterest.csv
Covid19Il6JakInhibitorsSccs/inst/shiny/EvidenceExplorer/DataPulls.R
Covid19Il6JakInhibitorsSccs/inst/shiny/EvidenceExplorer/EvidenceExplorer.Rproj
Covid19Il6JakInhibitorsSccs/inst/shiny/EvidenceExplorer/PlotsAndTables.R
Covid19Il6JakInhibitorsSccs/inst/shiny/EvidenceExplorer/Table1Specs.csv
Covid19Il6JakInhibitorsSccs/inst/shiny/EvidenceExplorer/global.R Covid19Il6JakInhibitorsSccs/inst/shiny/EvidenceExplorer/server.R Covid19Il6JakInhibitorsSccs/inst/shiny/EvidenceExplorer/ui.R
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/Adalimumab.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/CreateCohortTable.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/CreateCohortsToCharacterize.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/GetCounts.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/NegativeControlOutcomes.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/Tocilizumab.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/acuteMyocardialInfarction.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/acutePancreatitis.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/acuteRenalFailure.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/angioedema.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/bradycardia.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/cardiacArrhythmia.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/chestPainOrAngina.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/endStageRenalDisease.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/gastrointestinalBleeding.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/heartFailure.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/hepaticFailure.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/stroke.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/totalCardiovascularDiseaseEvents.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/transientIschemicAttack.sql
Covid19Il6JakInhibitorsSccs/inst/sql/sql_server/venousThromboembolicEvents.sql
Covid19Il6JakInhibitorsSccs/man/Covid19Il6JakInhibitorsSccs-package.Rd
Covid19Il6JakInhibitorsSccs/man/createCohorts.Rd
Covid19Il6JakInhibitorsSccs/man/deleteHoiFiles.Rd
Covid19Il6JakInhibitorsSccs/man/execute.Rd Covid19Il6JakInhibitorsSccs/man/exportResults.Rd Covid19Il6JakInhibitorsSccs/man/launchEvidenceExplorer.Rd Covid19Il6JakInhibitorsSccs/man/prepareForEvidenceExplorer.Rd
Covid19Il6JakInhibitorsSccs/man/runSelfControlledCaseSeries.Rd
Covid19Il6JakInhibitorsSccs/man/uploadResults.Rd
DESCRIPTION
HydraConfig.json
NAMESPACE
R/CohortMethod.R R/CreateAllCohorts.R R/CreateCohorts.R R/Diagnostics.R R/Export.R R/Main.R R/Package.R R/ShinyApps.R R/SubmitResults.R R/SynthesizePositiveControls.R README.md badgesMarkdownCode.md documents/README.md extras/CodeToRun.R extras/PackageMaintenance.R
inst/cohorts/LEGEND_HTN_Acute_myocardial_infarction_events.json
inst/cohorts/LEGEND_HTN_Acute_pancreatitis_events.json
inst/cohorts/LEGEND_HTN_Acute_renal_failure_events.json
inst/cohorts/LEGEND_HTN_Allcause_mortality.json
inst/cohorts/LEGEND_HTN_Cardiovascularrelated_mortality.json
inst/cohorts/LEGEND_HTN_Gastrointestinal_bleeding_events.json
inst/cohorts/LEGEND_HTN_Person_with_cardiac_arrhythmia.json
inst/cohorts/LEGEND_HTN_Persons_with_bradycardia.json
inst/cohorts/LEGEND_HTN_Persons_with_chest_pain_or_angina.json
inst/cohorts/LEGEND_HTN_Persons_with_end_stage_renal_disease.json
inst/cohorts/LEGEND_HTN_Persons_with_heart_failure.json
inst/cohorts/LEGEND_HTN_Persons_with_hepatic_failure.json
inst/cohorts/LEGEND_HTN_Stroke_ischemic_or_hemorrhagic_events.json
inst/cohorts/LEGEND_HTN_Total_cardiovascular_disease_events.json
inst/cohorts/LEGEND_HTN_Transient_ischemic_attack_events.json
inst/cohorts/LEGEND_HTN_Venous_thromboembolic_pulmonary_embolism_and_deep_vein_thrombosis_events_.json
inst/cohorts/OHDSI_COV19_Hospitalizations_with_pneumonia.json
inst/cohorts/OHDSI_Cov19_Episodes_of_influenza.json
inst/cohorts/OHDSI_Cov19_Episodes_of_influenza_symptoms_or_complications.json
inst/cohorts/OHDSI_Cov19_New_users_of_Baricitinib_with_prior_rheumatoid_arthritis.json
inst/cohorts/OHDSI_Cov19_New_users_of_adalimumab_with_prior_rheumatoid_arthritis.json
inst/cohorts/OHDSI_Cov19_New_users_of_sarilumab_with_prior_rheumatoid_arthritis.json
inst/cohorts/OHDSI_Cov19_New_users_of_sulfasazine_with_prior_rheumatoid_arthritis.json
inst/cohorts/OHDSI_Cov19_New_users_of_tocilizumab_with_prior_rheumatoid_arthritis.json
inst/settings/CohortsToCreate.csv
inst/settings/NegativeControls.csv
inst/settings/StudySpecification.json
inst/settings/TcosOfInterest.csv
inst/settings/cmAnalysisList.json
inst/shiny/EvidenceExplorer/DataPulls.R
inst/shiny/EvidenceExplorer/EvidenceExplorer.Rproj
inst/shiny/EvidenceExplorer/PlotsAndTables.R
inst/shiny/EvidenceExplorer/Table1Specs.csv
inst/shiny/EvidenceExplorer/global.R inst/shiny/EvidenceExplorer/server.R inst/shiny/EvidenceExplorer/ui.R
inst/sql/sql_server/CreateCohortTable.sql
inst/sql/sql_server/GetCounts.sql
inst/sql/sql_server/LEGEND_HTN_Acute_myocardial_infarction_events.sql
inst/sql/sql_server/LEGEND_HTN_Acute_pancreatitis_events.sql
inst/sql/sql_server/LEGEND_HTN_Acute_renal_failure_events.sql
inst/sql/sql_server/LEGEND_HTN_Allcause_mortality.sql
inst/sql/sql_server/LEGEND_HTN_Cardiovascularrelated_mortality.sql
inst/sql/sql_server/LEGEND_HTN_Gastrointestinal_bleeding_events.sql
inst/sql/sql_server/LEGEND_HTN_Person_with_cardiac_arrhythmia.sql
inst/sql/sql_server/LEGEND_HTN_Persons_with_bradycardia.sql
inst/sql/sql_server/LEGEND_HTN_Persons_with_chest_pain_or_angina.sql
inst/sql/sql_server/LEGEND_HTN_Persons_with_end_stage_renal_disease.sql
inst/sql/sql_server/LEGEND_HTN_Persons_with_heart_failure.sql
inst/sql/sql_server/LEGEND_HTN_Persons_with_hepatic_failure.sql
inst/sql/sql_server/LEGEND_HTN_Stroke_ischemic_or_hemorrhagic_events.sql
inst/sql/sql_server/LEGEND_HTN_Total_cardiovascular_disease_events.sql
inst/sql/sql_server/LEGEND_HTN_Transient_ischemic_attack_events.sql
inst/sql/sql_server/LEGEND_HTN_Venous_thromboembolic_pulmonary_embolism_and_deep_vein_thrombosis_events_.sql
inst/sql/sql_server/NegativeControlOutcomes.sql
inst/sql/sql_server/OHDSI_COV19_Hospitalizations_with_pneumonia.sql
inst/sql/sql_server/OHDSI_Cov19_Episodes_of_influenza.sql
inst/sql/sql_server/OHDSI_Cov19_Episodes_of_influenza_symptoms_or_complications.sql
inst/sql/sql_server/OHDSI_Cov19_New_users_of_Baricitinib_with_prior_rheumatoid_arthritis.sql
inst/sql/sql_server/OHDSI_Cov19_New_users_of_adalimumab_with_prior_rheumatoid_arthritis.sql
inst/sql/sql_server/OHDSI_Cov19_New_users_of_sarilumab_with_prior_rheumatoid_arthritis.sql
inst/sql/sql_server/OHDSI_Cov19_New_users_of_sulfasazine_with_prior_rheumatoid_arthritis.sql
inst/sql/sql_server/OHDSI_Cov19_New_users_of_tocilizumab_with_prior_rheumatoid_arthritis.sql
man/Covid19EstimationIl6JakInhibitors.Rd man/createCohorts.Rd man/execute.Rd man/exportResults.Rd man/generateDiagnostics.Rd man/launchEvidenceExplorer.Rd man/prepareForEvidenceExplorer.Rd man/runCohortMethod.Rd man/submitResults.Rd man/synthesizePositiveControls.Rd
ohdsi-studies/Covid19EstimationIl6JakInhibitors documentation built on June 28, 2020, 4:01 p.m.

R Package Documentation

rdrr.io home R language documentation Run R code online

Browse R Packages

CRAN packages Bioconductor packages R-Forge packages GitHub packages

We want your feedback!

Note that we can't provide technical support on individual packages. You should contact the package authors for that.
GitHub issue tracker
ian@mutexlabs.com
Personal blog

 
Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.

Close