Files in ohdsi-studies/Eumaeus
Evaluating Use of Methods for Adverse Event Under Surveillance
.Rbuildignore
.Rprofile
.gitignore
DESCRIPTION
Documents/LegendHtnTable.csv
Documents/OHDSI_page_header.pdf
Documents/OHDSI_toc_header.png
Documents/OutcomeCohortTable.csv
Documents/PhenotypeLibraryDescriptions.csv
Documents/PrintCohortDefinitions.R
Documents/Protocol-draft.docx
Documents/Protocol.Rmd
Documents/Protocol.bib
Documents/Protocol.html
Documents/Protocol.pdf
Documents/ResultsSchema.Rmd
Documents/StudySchematic.pdf
Documents/StudySchematic.png
Documents/StudySchematic.pptx
Documents/StudySchematic_keynote.key
Documents/header.tex
Documents/jamia.csl
Documents/style.css
Documents/template.docx
Documents/title.tex
Eumaeus.Rproj
NAMESPACE
NEWS.md
R/CaseControl.R
R/Characterization.R
R/CohortDiagnosics.R
R/CohortMethod.R
R/CompareCohorts.R
R/CreateAllCohorts.R
R/CreateCohorts.R
R/CriticalValues.R
R/Diagnostics.R
R/Eumaeus.R
R/Export.R
R/FilteredHistoricalComparator.R
R/HelperFunctions.R
R/HistoricalComparator.R
R/Main.R
R/PerMonthCohortMethod.R
R/SelfControlledCaseSeries.R
R/SubmitResults.R
R/SynthesizePositiveControls.R
R/UploadResultsToDatabase.R
README.md
docs/Protocol.html
docs/ResultsSchema.html
extras/AddImputedPositiveControls.R
extras/AnalyseResults.R
extras/CheckPsOverlapWhileRunning.R
extras/CodeToRerunCvs.R
extras/CodeToRerunRandomDayStratifiedComparator.R
extras/CodeToRun.R
extras/CodeToRunLikelihoodProfiles.R
extras/CodeToRunNewAnalyses.R
extras/CoordinatingCenterCode.R
extras/CopyCohortTableToNewEnvironment.R
extras/EmpiricalCalibrationMaxSprtSuppl/RunSimulationStudies.R
extras/EmpiricalCalibrationMaxSprtSuppl/SimulationFunctions.R
extras/EumaeusViewer/.gitignore
extras/EumaeusViewer/AppMaintenance.R
extras/EumaeusViewer/EumaeusViewer.Rproj
extras/EumaeusViewer/calibration.html
extras/EumaeusViewer/dataPulls.R
extras/EumaeusViewer/databases.html
extras/EumaeusViewer/evalType.html
extras/EumaeusViewer/global.R
extras/EumaeusViewer/methods.html
extras/EumaeusViewer/metrics.html
extras/EumaeusViewer/minimumOutcomes.html
extras/EumaeusViewer/period.html
extras/EumaeusViewer/plotsAndTables.R
extras/EumaeusViewer/server.R
extras/EumaeusViewer/timeAtRisk.html
extras/EumaeusViewer/trueRr.html
extras/EumaeusViewer/ui.R
extras/EumaeusViewer/vaccine.html
extras/EumaeusViewer/www/favicon.ico
extras/EumaeusViewer/www/logo.png
extras/ExploreCohorts.R
extras/ExploreDoseGaps.R
extras/GetDatabaseVersion.R
extras/MaxSprtSimulations.R
extras/PackageMaintenance.R
extras/RatesNearEndOfDb.R
extras/ResampleStratifiedRandomDay.sql
extras/ResultsDataModel.R
inst/Documents/LegendHtnTable.csv
inst/Documents/OHDSI_page_header.pdf
inst/Documents/OHDSI_toc_header.png
inst/Documents/OutcomeCohortTable.csv
inst/Documents/PhenotypeLibraryDescriptions.csv
inst/Documents/Protocol.Rmd
inst/Documents/Protocol.bib
inst/Documents/StudySchematic.pdf
inst/Documents/StudySchematic.png
inst/Documents/StudySchematic.pptx
inst/Documents/StudySchematic_keynote.key
inst/Documents/header.tex
inst/Documents/jamia.csl
inst/Documents/style.css
inst/Documents/title.tex
inst/cohorts/AllFluVaccines.json
inst/cohorts/ComirnatyCovid19.json
inst/cohorts/Fluvirin.json
inst/cohorts/Fluzone.json
inst/cohorts/Gardasil9.json
inst/cohorts/H1N1Exclusion.json
inst/cohorts/H1N1vaccination.json
inst/cohorts/HpvExclusion.json
inst/cohorts/MyocarditisPericarditis.json
inst/cohorts/SeasonalFluExclusion.json
inst/cohorts/Shingrix.json
inst/cohorts/SpikevaxCovid19.json
inst/cohorts/ZosterExclusion.json
inst/settings/Analyses.csv
inst/settings/CohortsToCreate.csv
inst/settings/ExposuresOfInterest.csv
inst/settings/NegativeControls.csv
inst/settings/cmAnalysisSettings.txt
inst/settings/resultsModelSpecs.csv
inst/sql/postgresql/CreateResultsTables.sql
inst/sql/sql_server/AllFluVaccines.sql
inst/sql/sql_server/ComputeExposureCountPerMonth.sql
inst/sql/sql_server/ComputeIncidenceRatesNearDbEnd.sql
inst/sql/sql_server/ComputePopulationIncidenceRate.sql
inst/sql/sql_server/CreateCohortTable.sql
inst/sql/sql_server/DeriveExposureCohorts.sql
inst/sql/sql_server/Fluvirin.sql
inst/sql/sql_server/Fluzone.sql
inst/sql/sql_server/Gardasil9.sql
inst/sql/sql_server/H1N1Exclusion.sql
inst/sql/sql_server/H1N1vaccination.sql
inst/sql/sql_server/HpvExclusion.sql
inst/sql/sql_server/NegativeControlOutcomes.sql
inst/sql/sql_server/SampleComparators.sql
inst/sql/sql_server/SeasonalFluExclusion.sql
inst/sql/sql_server/Shingrix.sql
inst/sql/sql_server/ZosterExclusion.sql
man/Eumaeus-package.Rd
man/createResultsDataModel.Rd
man/execute.Rd
man/getExposuresOfInterest.Rd
man/getResultsDataModelSpecifications.Rd
man/runCohortDiagnostics.Rd
man/uploadResults.Rd
man/uploadResultsToDatabase.Rd
renv.lock
renv.lock.v40
renv.lock.v42
renv/.gitignore
renv/activate.R
