Man pages for ohdsi-studies/ScyllaCharacterization
Characterize all emerging drug therapies used in COVID-19 treatment
| copyAndCensorCohorts | Copy the cohorts from the cohortStagingTable to the... |
| createBulkCharacteristics | Create cohort characteristics in bulk |
| createBulkSubgroup | Create bulk subgroup cohorts |
| createBulkSubgroupFromCohorts | Create subgroup cohorts by finding the intersection of target... |
| createBulkSubgroupFromFile | Create bulk subgroups from settings file |
| createCohortTable | Create cohort table(s) |
| getBulkSubgroup | Get the bulk subgroups from the resource file |
| getCohortBasedSubgroup | Get the cohort subgroups from the resource file |
| getCohortCharacteristics | Create characterization of a cohort |
| getCohortGroups | Get the cohort groups from the resource file |
| getCohortsToCreate | Get the full list of cohorts to create for the study |
| getFeatures | Get the cohort used for features from the resorce file |
| getInclusionStatistics | Get statistics on cohort inclusion criteria |
| getInclusionStatisticsFromFiles | Get inclusion criteria statistics from files |
| getTargetSubgroupXref | Get the list of sub-grouped target cohorts |
| instantiateCohortSet | Instantiate a set of cohort |
| preMergeResultsFiles | Premerge Shiny results files |
| ScyllaCharacterization-package | ScyllaCharacterization: Characterize all emerging drug... |
| uploadResults | Upload results to OHDSI server |
| writeBulkCharacteristics | Write cohort characteristics in bulk to the file system |
