Man pages for pablosanchezmart/TrEvol
What the Package Does (One Line, Title Case)
| completePhyloData | Return complete data for phylogeny and tabular data |
| computeCovariancePartition | Covariance partition including (or not) environment |
| computeVarianceCovariancePartition | Phylogenetic variance and covariance partition including (or... |
| computeVariancePartition | Variance partition including (or not) environment |
| defineModelsSpecifications | Define _mcmcglmm_ (Bayesian Phylogenetic Mixed Models)... |
| diagnoseModels | Diangose _mcmcglmm_ model autocorrelation, convergence and... |
| getPlotNetworkData | Get data to plot networks |
| imputeTraits | Impute traits using phylogenetic, environmental and traits... |
| initializeTrEvo | Create and define results and outputs folders structure. |
| meanOrMode | Return mean if variable is numeric or mode if variable is... |
| pipe | Pipe operator |
| plotData | Plot data on the phylogeny |
| plotNetwork | Plot variance-covariance networks |
| plotPairwiseDistances | Plot pairwise distances using distanace matrices |
| plotVcv | Plot variance-covariance matrix (phylogenetic signal and... |
| plotVcvScatterplots | Plot scatterplots showing the variance-covariancae related to... |
| simulateDataSet | Simulate a list of photogenically correlated and... |
