Files in palderman/DSSAT

A Comprehensive R Interface for the DSSAT Cropping Systems Model

.github/ISSUE_TEMPLATE/bug_report.md NEWS.md R/DSSAT_tbl_df_class.R R/add_col_widths.R R/add_level_column.R R/add_v_fmt.R R/calc_TAV_AMP.R R/check_col_types.R R/check_column_width.R R/check_numeric_fmt.R R/check_numerical_column_width.R R/clear_output.R R/coalesce_merge.R R/col_types_to_vec.R R/collapse_rows.R R/combine_multi_section.R R/combine_simulation_controls.R R/combine_tiers.R R/concat_lines.R R/construct_variable_format.R R/convert_to_date.R R/create_call_test_cols_check.R R/cul_template.R R/cul_tier_info.R R/cul_title.R R/cul_v_fmt.R R/de_regex.R R/drop_comments.R R/drop_empty_lines.R R/dssat_na_strings.R R/eco_template.R R/eco_tier_info.R R/eco_title.R R/eco_v_fmt.R R/expand_grid.R R/extr_substr.R R/extract_comments.R R/filex_expand_section.R R/filex_sanitize_section.R R/filex_template.R R/filex_template_cultivars.R R/filex_template_fertilizers.R R/filex_template_fields.R R/filex_template_general.R R/filex_template_harvest_details.R R/filex_template_planting_details.R R/filex_template_simulation_controls.R R/filex_template_treatments.R R/filex_tier_info.R R/filex_v_fmt.R R/filter_for_all_equal.R R/find_filex.R R/find_filex_tier.R R/find_pedon.R R/find_section.R R/find_tier.R R/fix_sol_fmt.R R/fmt_comments.R R/get_dssat_version.R R/get_start_end.R R/guess_significant_digits.R R/header_to_fwf_position.R R/invert_collapse_rows.R R/is_POSIXct.R R/is_sol_layer.R R/missing_columns.R R/mutate_cond.R R/na_to_minus_99.R R/name_to_regex.R R/nest_rows.R R/process_dssat_output_header.R R/read_casupro_eco.R R/read_cul.R R/read_dssat.R R/read_dssbatch.R R/read_eco.R R/read_filea.R R/read_filet.R R/read_filex.R R/read_filex_multiple.R R/read_filex_tier_by_header.R R/read_fixed_width.R R/read_horizontal_array.R R/read_output.R R/read_pest.R R/read_soil_profile.R R/read_sol.R R/read_sol_gen_info.R R/read_tier.R R/read_tier_data.R R/read_wth.R R/reconcile_gaps.R R/reconcile_v_fmt.R R/recursive_merge.R R/run_dssat.R R/sanitize_raw_lines.R R/sol_tier_info.R R/sol_v_fmt.R R/splice_in_col_name.R R/string_count.R R/v_fmt_to_col_types.R R/v_fmt_to_fwf_pos.R R/v_fmt_to_fwf_widths.R R/v_fmt_to_type.R R/v_fmt_to_width.R R/write_POSIXct.R R/write_casupro_eco.R R/write_column.R R/write_cul.R R/write_dssbatch.R R/write_dual_tier_section.R R/write_eco.R R/write_filea.R R/write_filet.R R/write_filex.R R/write_sim_ctrl_section.R R/write_soil_profile.R R/write_sol.R R/write_tier.R R/write_wth.R R/wth_v_fmt.R R/zzz.R README.md cran-comments.md inst/tinytest/convert_from_test_that.R inst/tinytest/test_01_setup.R inst/tinytest/test_cols_check.R inst/tinytest/test_filex_template.R inst/tinytest/test_header_to_fwf_position_CUL.R inst/tinytest/test_header_to_fwf_position_ECO.R inst/tinytest/test_header_to_fwf_position_FileA.R inst/tinytest/test_header_to_fwf_position_FileT.R inst/tinytest/test_header_to_fwf_position_FileX.R inst/tinytest/test_header_to_fwf_position_OUT.R inst/tinytest/test_header_to_fwf_position_SOL.R inst/tinytest/test_header_to_fwf_position_SPE.R inst/tinytest/test_header_to_fwf_position_WTH.R inst/tinytest/test_read_cul.R inst/tinytest/test_read_dssat.R inst/tinytest/test_read_eco.R inst/tinytest/test_read_filex.R inst/tinytest/test_read_filex_std_fmt.R inst/tinytest/test_read_sol.R inst/tinytest/test_v_fmt_to_fwf_pos.R inst/tinytest/test_write_eco.R inst/tinytest/test_write_filex.R inst/tinytest/test_write_wth.R inst/tinytest/update_test_data_path.R man/add_col_widths.Rd man/add_v_fmt.Rd man/as_DSSAT_tbl.Rd man/calc_AMP.Rd man/calc_TAV.Rd man/clear_output.Rd man/combine_tiers.Rd man/convert_to_date.Rd man/header_to_fwf_position.Rd man/mutate_cond.Rd man/name_to_regex.Rd man/process_dssat_output_header.Rd man/read_casupro_eco.Rd man/read_cul.Rd man/read_dssat.Rd man/read_dssbatch.Rd man/read_eco.Rd man/read_filea.Rd man/read_filet.Rd man/read_filex.Rd man/read_filex_multiple.Rd man/read_output.Rd man/read_pest.Rd man/read_soil_profile.Rd man/read_sol.Rd man/read_tier.Rd man/read_tier_data.Rd man/read_wth.Rd man/run_dssat.Rd man/splice_in_col_name.Rd man/write_casupro_eco.Rd man/write_cul.Rd man/write_dssbatch.Rd man/write_dssbatch.data.frame.Rd man/write_dssbatch.default.Rd man/write_dssbatch.tbl_df.Rd man/write_eco.Rd man/write_filea.Rd man/write_filet.Rd man/write_filex.Rd man/write_sol.Rd man/write_tier.Rd man/write_wth.Rd manuscript/DSSAT_R_Package.Rmd test_data/read_eco/ALFRM048_ECO.R test_data/read_eco/BACER048_ECO.R test_data/read_eco/BACRP048_ECO.R test_data/read_eco/BHGRO048_ECO.R test_data/read_eco/BMFRM048_ECO.R test_data/read_eco/BNGRO048_ECO.R test_data/read_eco/BRFRM048_ECO.R test_data/read_eco/BRGRO048_ECO.R test_data/read_eco/BSCER048_ECO.R test_data/read_eco/CBGRO048_ECO.R test_data/read_eco/CHGRO048_ECO.R test_data/read_eco/CIGRO048_ECO.R test_data/read_eco/CNGRO048_ECO.R test_data/read_eco/COGRO048_ECO.R test_data/read_eco/CPGRO048_ECO.R test_data/read_eco/CSCAS048_ECO.R test_data/read_eco/CSYCA048_ECO.R test_data/read_eco/FBGRO048_ECO.R test_data/read_eco/G0GRO048_ECO.R test_data/read_eco/GBGRO048_ECO.R test_data/read_eco/GGFRM048_ECO.R test_data/read_eco/MLCER048_ECO.R test_data/read_eco/MZCER048_ECO.R test_data/read_eco/MZIXM048_ECO.R test_data/read_eco/PNGRO048_ECO.R test_data/read_eco/PPGRO048_ECO.R test_data/read_eco/PRGRO048_ECO.R test_data/read_eco/PTSUB048_ECO.R test_data/read_eco/QUGRO048_ECO.R test_data/read_eco/SBGRO048_ECO.R test_data/read_eco/SCCAN048_ECO.R test_data/read_eco/SCCSP048_ECO.R test_data/read_eco/SCSAM048_ECO.R test_data/read_eco/SFGRO048_ECO.R test_data/read_eco/SGCER048_ECO.R test_data/read_eco/SUGRO048_ECO.R test_data/read_eco/SUOIL048_ECO.R test_data/read_eco/SWCER048_ECO.R test_data/read_eco/TFAPS048_ECO.R test_data/read_eco/TMGRO048_ECO.R test_data/read_eco/VBGRO048_ECO.R test_data/read_eco/WHAPS048_ECO.R test_data/read_eco/WHCER048_ECO.R test_data/read_eco/WHCRP048_ECO.R test_data/write_eco/ALFRM048_ECO.R test_data/write_eco/BACER048_ECO.R test_data/write_eco/BACRP048_ECO.R test_data/write_eco/BHGRO048_ECO.R test_data/write_eco/BMFRM048_ECO.R test_data/write_eco/BNGRO048_ECO.R test_data/write_eco/BRFRM048_ECO.R test_data/write_eco/BRGRO048_ECO.R test_data/write_eco/BSCER048_ECO.R test_data/write_eco/CBGRO048_ECO.R test_data/write_eco/CHGRO048_ECO.R test_data/write_eco/CIGRO048_ECO.R test_data/write_eco/CNGRO048_ECO.R test_data/write_eco/COGRO048_ECO.R test_data/write_eco/CPGRO048_ECO.R test_data/write_eco/CSCAS048_ECO.R test_data/write_eco/CSYCA048_ECO.R test_data/write_eco/FBGRO048_ECO.R test_data/write_eco/G0GRO048_ECO.R test_data/write_eco/GBGRO048_ECO.R test_data/write_eco/GGFRM048_ECO.R test_data/write_eco/MLCER048_ECO.R test_data/write_eco/MZCER048_ECO.R test_data/write_eco/MZIXM048_ECO.R test_data/write_eco/PNGRO048_ECO.R test_data/write_eco/PPGRO048_ECO.R test_data/write_eco/PRGRO048_ECO.R test_data/write_eco/PTSUB048_ECO.R test_data/write_eco/QUGRO048_ECO.R test_data/write_eco/SBGRO048_ECO.R test_data/write_eco/SCCAN048_ECO.R test_data/write_eco/SCCSP048_ECO.R test_data/write_eco/SCSAM048_ECO.R test_data/write_eco/SFGRO048_ECO.R test_data/write_eco/SGCER048_ECO.R test_data/write_eco/SUGRO048_ECO.R test_data/write_eco/SUOIL048_ECO.R test_data/write_eco/SWCER048_ECO.R test_data/write_eco/TFAPS048_ECO.R test_data/write_eco/TMGRO048_ECO.R test_data/write_eco/VBGRO048_ECO.R test_data/write_eco/WHAPS048_ECO.R test_data/write_eco/WHCER048_ECO.R test_data/write_eco/WHCRP048_ECO.R tests/tinytest.R