Man pages for patelm9/hemOncExt
HemOncExt package

addConceptIdsReplace the "NEW" in the label with a Concept Id
checkCardinalityCheck Regimen Cardinality of 1:1
checkFormatCheck Format of Data Contents
checkIngredientColAdd Ingredient Column
conceptCONCEPT
conceptIdExistsDoes this concept_id already exist?
concept_relationshipCONCEPT_RELATIONSHIP
concept_synonymCONCEPT_SYNONYM
configureInputConfigure Input
constrainHemOncExtSchemaConstrain Standardized Vocabulary Tables
convertConceptTableConvert the Processed New Concepts to a CONCEPT Table
convertRelationshipTableConvert the Processed New Concepts to a Concept Relationship...
createHemOncExtSchemaCreate the HemOnc Extension Schema
ddlHemOncExtSchemaDDL Standardized Vocabulary Tables
extractNewRegimenNameExtract the New Regimen Name from Regimen Column
filterAnyNewConceptFilter New Concepts
filterOutNAFilter out Empty Rows
getIdentifierMake a Single Identifier
ingestConceptTableIngest New Concept
ingestRelationshipTableIngest New Concept Relationship
isLocalIdentifierCheck if an Identifier was Locally Created
migrateConceptMigrate HemOnc and RxNorm Vocabularies
migrateConceptAncestorMigrate HemOnc and RxNorm Vocabularies Ancestry
migrateConceptAncestor2Migrate HemOnc and RxNorm Vocabularies Ancestry
migrateConceptRelationshipMigrate HemOnc and RxNorm Vocabularies Relationships
migrateConceptSynonymMigrate HemOnc and RxNorm Vocabularies Synonyms
parseIdentifierParse Datetime from a Local Identifier
parseIdentifierColParse a Column of Identifiers
separateRowsInputSeparate Input Rows
splitByNewRegimenTypeSplit New Regimen by Type
updateRawDataUpdate HemOnc Extension Data in raw-data
patelm9/hemOncExt documentation built on Dec. 2, 2020, 1:35 a.m.