Man pages for pedersen-fisheries-lab/spaspm
Spatial Surplus Production Model Framework for Northern Shrimp Populations
| accessors-methods-discret_method | Accessing OR replacing 'discretization_method' model elements |
| accessors-methods-sspm_boundary | Accessing OR replacing 'sspm_boundary' model elements |
| accessors-methods-sspm_dataset | Accessing OR replacing 'sspm_dataset' model elements |
| accessors-methods-sspm_fit | Accessing OR replacing 'sspm_fit' model elements |
| accessors-methods-sspm_formula | Accessing OR replacing 'sspm_formula' model elements |
| as_discretization_method | Cast into a 'discretization_method' object |
| borealis_simulated | Simulated biomass data |
| catch_simulated | Simulated catch data |
| discretization_method-class | sspm discretization method class |
| extract-methods | Extract methods |
| fit | Fit the GAM part of a sspm model |
| intervals | GAM confidence and prediction intervals |
| map_formula | Map model formula onto a sspm_dataset object |
| pipe | Pipe operator |
| plot | Plot 'sspm' objects |
| predator_simulated | Simulated predator data |
| predict | Predict with a SPM model |
| sfa_boundaries | SFA boundaries data |
| smooths | sspm Smoothing functions |
| spm | Fit an SPM model |
| spm_aggregate | Aggregate a dataset or fit data variable based on a boundary |
| spm_aggregate_catch | Update biomass value from catch adta |
| spm_as_boundary | Create a sspm_boundary object |
| spm_as_dataset | Create a 'sspm_dataset' dataset structure |
| spm_discretize | Discretize a 'sspm' model object |
| spm_lag | Create lagged columns in a sspm smoothed data slot |
| spm_methods | Get the list of available discretization methods |
| spm_smooth | Smooth a variable in a sspm dataset |
| spm_smooth_methods | Get the list of available smoothing methods |
| spm_split | Split data in test and train sets |
| sspm-accessors-methods | Accessing OR replacing 'sspm' model elements |
| sspm_boundary-class | sspm boundary structure |
| sspm-class | sspm model class |
| sspm-constructor | Create a 'sspm' model object |
| sspm_dataset-class | sspm dataset structure |
| sspm_discrete_boundary-class | sspm discrete boundary structure |
| sspm_fit-class | sspm fit |
| sspm_formula-class | sspm formula object |
| sspm-package | sspm: Spatial Surplus Production Model Framework for Northern... |
| summary | Summarises 'sspm_fit' objects |
| tesselate_voronoi | Perform voronoi tesselation |
| triangulate_delaunay | Perform delaunay triangulation |
