Man pages for pernille267/commutability.selectivity
Commutability and non-selectivity evaluation tools
| approximate_expectation_k | Approximate expectation of k given number of clinical samples... |
| approximate_variance_k | Approximate variance of k given number of clinical samples... |
| attach_k_values_over_groups | Attach calculated k values for each group |
| Deming_CLSI_EP14 | Estimate prediction band using Deming regression formulated... |
| Deming_CLSI_EP14_over_groups | Estimate prediction band using Deming regression formulated... |
| Deming_Gillard_Fuller | Estimate prediction band using Deming regression formulated... |
| Deming_Gillard_Fuller_over_groups | Estimate prediction band using Deming regression formulated... |
| estimate_k | Estimate a k value based on one MS comparison |
| estimate_k_over_groups | Calculate k values over multiple groups |
| fix_column_names | Automatically fix column names using the first algorithm |
| fix_column_names_2 | Automatically fix column names using the second algorithm |
| fix_reverse_issues | Based on lambda, which set of measurement system measurements... |
| get_optimal_binwidth | Calculate the optimal binwidths for histograms based on... |
| gro_bootstrap | bootstrap estimates |
| gro_resample | resample values in one specific group |
| gro_standard | XXX |
| heteroscedasticity_test | Testing for variance-inhomogeneity using Breauch-Pagan test... |
| mc_sdwdnsp1 | Simulate several data sets with different non-selectivity... |
| mc_sdwdnsp2 | Simulate several data sets with different non-selectivity... |
| mc_sdwinsp | Simulate several data sets with identical non-selectivity... |
| mc_sdwinsp2 | Simulate several data sets with identical non-selectivity... |
| mean_of_replicates | Calculate mean of replicates over Sample IDs and possibly... |
| mean_of_replicates_2 | Calculate mean of replicates over Sample IDs and possibly... |
| MS_precision | Estimate precision of measurement systems in comparison based... |
| MS_precision_over_groups | Estimate MS precision over multiple groups |
| MS_wise | Converting standard wide format MS comparison data (WFDT) to... |
| MS_wise_2 | Converting standard wide format MS comparison data (WFDT) to... |
| normality_test | Checks normality of error terms by using Shapiro Wilk's test... |
| Ordinary_Least_Squares | Estimate prediction band or prediction intervals using... |
| Ordinary_Least_Squares_over_groups | Estimate prediction band or prediction intervals using... |
| plot_precision_against_concentration | plot precision against concentration |
| plot_residual_histograms | Plotting of histograms of residuals to visualize the... |
| plot_residual_vs_fitted | Plot residual vs. fitted plots for your data |
| precision_of_replicates | Estimate precision estimates for each clinical sample over... |
| present_commutability_evaluation_results | Present every evaluated materials' commutability for every... |
| present_k_values_bs | Present calculated k values with bootstrapped confidence... |
| present_MS_precision_estimates | Present precision estimates for unique measurement systems |
| present_MS_precision_estimates_bs | Present precision estimates with bootstrapped confidence... |
| resample_k | Resample k based on data |
| resample_k_over_groups | Resample k values based on grouped data |
| resample_MS_precision | Resample MS precision values based on data |
| resample_MS_precision_over_groups | Resample MS precision values based on grouped data |
| resample_replicated_data | Resample data with replicated measurements |
| residual_histogram_data | Prepare data for constructing histograms of residuals |
| residual_vs_fitted | Summarize to residuals vs fitted for each group |
| sampled_cs_measurements | Measurement results for 25 different clinical samples |
| sampled_eqam_measurements | Measurement results for five different EQAM materials |
| sdwdnsp1 | Simulation of homoscedastic data with different... |
| sdwdnsp2 | Simulation of homoscedastic data with different... |
| sdwinsp | Simulation of data with identical ns profiles |
| sdwinsp2 | Simulation of heteroscedastic data with identical... |
| simulate_k | Simulate k values based on simulation function |
| studentize | Studentize data using the standard technique |
