Strand specific peak-pair calling in ChIP-exo replicates. The cumulative Skellam distribution function is used to detect significant normalised count differences of opposed sign at each DNA strand (peak-pairs). Then, irreproducible discovery rate for overlapping peak-pairs across biological replicates is computed.
Package details |
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Bioconductor views | ChIPSeq Coverage FunctionalGenomics PeakDetection Sequencing |
Maintainer | |
License | Artistic-2.0 | GPL-2 + file LICENSE |
Version | 1.35.1 |
Package repository | View on GitHub |
Installation |
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