Man pages for pointblue/RMN.functions
| add.pointyear | Adds year and pointyear columns to data |
| add.soilcolumns | Add date, year, and survey ID columns |
| add.zeros | Adds zeros to dataframe for statistical analysis |
| add.zeros.commonName | prepare data with common names |
| add.zeros.count | Adds zeros to dataframe for statistical analysis |
| add.zeros.noCount | Adds zeros to dataframe for statistical analysis |
| all_remove.first | Removes first row of df if it is missing. |
| all_remove.first2 | Remove first row of data frame if empty |
| all_Tidynames | Tidy column names in any data frame. |
| bird_birdcount.year | Create Species List |
| bird_convert.distance | Convert distance bins into continuous values |
| bird_focal.Abundance.Facet | Graph for species abundance by focal group |
| bird_focal.graph | Create a Focal Species Abundance per Year Graph |
| bird_focal.graph_Abundance | Graph for species abundance by focal group |
| bird_focal.groups | Create a Focal Species Abundance Graph. Bar for each:... |
| bird_MAPdistance.bin | Replaces Distance Bin Values from different RMN point count... |
| bird_prepare | Prepares bird data for analysis |
| bird_prep.columns | Adds columns to bird dataframe |
| bird_species.all | Creates Species dataframe |
| bird_species.common | Creates Species dataframe with common names |
| bird_species.list | Create Species List with common names |
| bird_species.narrow | Creates Species dataframe with Spp codes |
| bird_species.pointYear | Creates Species dataframe summarized by point and year. |
| bird_species.richness | Create a Species Richness per Point Graph |
| bird_subset.cue | Subset bird data based on detection cue |
| bird_subset.distance | Subsets point count distance to specified value |
| bird_updateSpeciesNames | Update species names. |
| bird_visits | Create Visit Table |
| bird_wide.data | Creates wide data frame for Point Count data |
| bird_wide.focal | Creates a subsetted wide data frame for Point Count data |
| carbon.plot | Carbon Plot |
| compaction.plot | Make a soil compaction plot |
| compaction.plot.exactValues | Make a soil compaction plot with exact values |
| cover.summary | Create cover summary table for veg data |
| cover.sum.plot | Plot species richness and cover |
| data.sum | Make a table to summarize data |
| extrapolate_inf | Extrapolate Infiltration Time |
| functional.cover.change.plot | Functional cover change summary plot |
| functional.cover.change.table | Functional cover change summary table |
| functional.cover.plot | Functional cover summary plot |
| functional.cover.table | Create a table of cover for functional groups at each point |
| hello | Hello, World! |
| long.lpi | Summarize number of lpi hits by species |
| numberOfPoints | Prepared data for by getting number of points |
| pair.data | Aggregate Soil Data by Point |
| percent.change.plot | Make a percent change boxplot of soil carbon and bulk Density |
| points.cover.plot | Create a plot of cover for functional groups at each point |
| prepareBirdRichnessData | Prepared data for visualization |
| prepareData_R_Abundance | Summarize data for analysis |
| read.date | Interpret data |
| se | Calculate standard error |
| soil.final.cleanup | Prepare soil data to make figures |
| species.cover.table | Create a table of cover for each species at each point |
| species.list | Create species list for veg data |
| survey.sums | Summarize data for soil survey visits |
| texture.triangle.plot | Make a soil texture triangle |
| toSeconds | Convert to seconds |
