Man pages for popgenvienna/poolseq
Simulate and Analyze Pool-seq Data
| af | Allele frequencies |
| af.traj | Allele frequency trajectories |
| alleles | Allelic information |
| checkSNP | Obtaine Appropriate SNPs for Ne Estimation |
| chi.sq.test | Vectorized Pearson's Chi-squared Test for Count Data |
| cmh.test | Vectorized Cochran-Mantel-Haenszel Test for Count Data |
| compareSH | Compare Selection Coefficients and Dominance between... |
| consensus.traj | Consensus Allele Frequency Trajectory |
| coverage | Sequence coverages |
| dmelER | Evolve and Resequencing Data |
| estimateNe | Estimate Effective Population Size |
| estimateSH | Estimate Selection Coefficient and Dominance |
| estimateWndNe | Estimate Effective Population Size for Genome-Wide Data |
| fixationBias | Bias Correction |
| lm.s | Estimate s with LLS |
| nls.sh | Estimate s and h with NLS |
| polarization | Polarization of allele frequencies |
| poolSeq-package | Analyze Pool-seq Data |
| read.sync | Read Sync-File Format |
| sample.alleles | Sample alleles |
| scaleAF | Scale Allele Frequencies |
| splitLocusID | Split Locus ID |
| sync | Sync Object - Creation and Usage |
| wf.traj | Simulate Random Genetic Drift |
