Man pages for qdread/forestscaling
Functions and Themes for Forest Light Scaling Project
| agb.allometry | Estimate aboveground biomass |
| annual_increment | Annualizing biomass increment (or diameter increment) |
| apply.eqn1 | Calculate equivalent diameter at 1.3 m |
| bayesian_rsquared_production | Get the Bayesian R-squared and its quantiles from Stan fit |
| bin_across_years | Combine bins across multple censuses |
| binprod | Continuous-data (point cloud) binning for production by light... |
| binscore | Continuous-data (point cloud) binning for PCA values |
| cloudbin_across_years | Create bins of continuous data across one or more censuses |
| fitted_predicted_values | Get fitted values and credible/prediction intervals from Stan... |
| fitted_slope_ci | Get the fitted log slope values at many points from Stan fit |
| gMM | Generalized Michaelis-Menten function |
| insolation | Insolation at a given latitude (approximation) |
| logbin | Logarithmic binning function |
| logbin_setedges | Logarithmic binning function with predefined edges |
| log_correction_factor | Correction factor to remove bias from log-transformation |
| logseq | Evenly spaced sequence in log space |
| midpts | Midpoints of a vector |
| param_values | Extract parameter values and their credible intervals from... |
| pct_light_captured | Proportion light captured by a crown |
| pdf_2part | PDF for density model 2 part |
| pdf_3part | PDF for density model 3 part |
| pdf_pareto | PDF for density model 1 part |
| pipe | Pipe operator |
| plot_dens | Plot single model fit with multiple functional groups for... |
| plot_prod | Plot single model fit with multiple functional groups for... |
| plot_prod_fixed | Another variant of production plotting function |
| plot_prod_withrawdata | Plot hexbin plot of production and/or fitted production... |
| plot_totalprod | Plot single model fit with multiple functional groups for... |
| powerlaw_hinge_log | Function for production model 2 parts (hinged) |
| powerlaw_log | Function for production model 1 part |
| taper_correct_dbh | Calculate the taper-corrected DBH for all individuals in one... |
| theme_plant | Forestlight plotting themes |
