API for qpmnguyen/microbe_set_trait
Reproducible analyses for evaluating trait-based taxon sets
| Global functions | |
|---|---|
| assess_correlation | Source code |
| assess_traits | Source code |
| call_genus_id | Source code |
| complete_fit | Source code |
| count_tax | Source code |
| count_traits | Source code |
| create_db | Source code |
| define_modelflow | Source code |
| eval_func | Source code |
| fit_gsva | Source code |
| fit_models | Source code |
| genus_assess | Source code |
| genus_from_species | Source code |
| get_gevers | Source code |
| get_ihmp | Source code |
| get_metadata | Source code |
| get_picrust2 | Source code |
| load_joint_sets | Source code |
| match_sets | Source code |
| plot_cov_granular | Source code |
| plot_coverage | Source code |
| proc_gtest | Source code |
| process_json | Source code |
| process_metacyc | Source code |
| query_metaphlan | Source code |
| query_standard | Source code |
| recode_sets | Source code |
| record_package | Source code |
| t_test | Source code |
| test_genus | Source code |
| theme_nice | Source code Source code |
| translate_ncbi | Source code |
| unify_sets | Source code |
