Man pages for qpmnguyen/teaR
Competitive Balances for Taxonomic Enrichment Analysis in R
| cbea | Enrichment analysis using competitive compositional balances... |
| check_args | Checking arguments of the function |
| check_distr_arg | This function checks for validity of arguments based on the... |
| combine_distr | Combining two distributions |
| dlst | Defintions for location-scale t distribution |
| dot-cbea | Internal cbea function |
| estimate_distr | Estimate distribution parameters from data |
| fit_scores | Function to compute CBEA scores for each set |
| get_adj_mnorm | Function to perform the adjustment for the mixture normal... |
| get_diagnostics | Get diagnostic values using parent environment. |
| get_mean | Get the overall mean of a two component mixture distribution |
| get_raw_score | Get CBEA scores for a given matrix and a vector of column... |
| get_sd | Get the overall standard deviation of a two component mixture... |
| glance.CBEAout | Glance at 'CBEAout' object |
| gmean | Geometric mean of a vector |
| gmeanRow | Geometric mean of rows of a matrix |
| hmp_gingival | Gingival data set from the Human Microbiome Project |
| merge_lists | This function handles the ability to merge supplied and... |
| new_CBEAout | Creating an output object of type CBEAout |
| pmnorm | The Two Component Mixture Normal Distribution |
| print.CBEAout | Print dispatch for CBEAout objects |
| reexports | Objects exported from other packages |
| scale_scores | Scaling scores based on estimated null distribution |
| tidy.CBEAout | Tidy a CBEAout object |
| var_setup | Setting up parameter arrays for vectorized call to d/pnorm... |
