Man pages for r-glennie/moveds
Fit Distance Sampling Models with Animal Movement
| CalcHazard | Calculates hazard of detection |
| CalcHazardDetected | Compute hazard of each detection within time-step |
| CalcInitialDistribution | Calculates the initial distribution of animal locations.... |
| CalcMovementLogLikelihood | Calculates movement model log-likelihood |
| CalcSurvivalPr | Computes the probability of survival for each spatial... |
| CalcTrm | Calculates the sparse transition rate matrix |
| check.input | Check inputs to mds function |
| Detect | Thins probability distribution by the proportion detected in... |
| Diffuse | Diffuse probability distribution over space |
| Discretise | Discretise transects and map detections to spatial grid |
| dot-onUnload | Unload moveds package compiled code |
| EstDiff | Estimate diffusion rate from tag data |
| example_mds_line | Example line transect data with movement |
| example_mds_line_mods | Example model fits to example_mds_line data |
| example_mds_point | Example point transect data with movement |
| example_mds_point_mods | Example model fits to example_mds_point data |
| GetHist | Computes PDF of observed detections for each (x,y) cell... |
| GetObserverPosition | Get observation location in 2D space |
| GetPenc | Computes covered area for entire survey |
| hazardfns | Hazard functions available in moveds package |
| InTransect | Computes what grid cells are inside and outside transect |
| logLik.mds | Return loglikelihood of a fitted MDS model |
| mds | Fit distance sampling with movement model |
| mds.gof | Chi-squared Goodness-of-fit tests |
| movedat | Example animal movement data |
| Natural2Working | Transform natural parameters to unconstrained working... |
| NegativeLogLikelihood | Computes negative log-likelihood of moveDs model |
| plot.mds | Plots fitted PDF from MDS model |
| point_movedat | Example animal movement data |
| predict.mds | Fit distance sampling with movement model |
| s2sigmab | Convert moveds s,d parameters to Hayes-Buckland b, sigma |
| SimulateMovementData | Simulate movement paths from Brownian motion |
| summary.mds | Summary of MDS fitted model |
| Working2Natural | Transform working parameters (for the optimiser) to natural... |
