| clustEM | Cluster phylogenetic tree using EM |
| clustPAM | Cluster phylogenetic tree using PAM |
| compareGap | Compare different clusterings of the same phylogenetic tree... |
| NwkTree | An example of a small Newick tree |
| NwkTree2 | An example of a bigger Newick tree |
| plotClusters2D | Plot phylogenetic tree clusters as a 2D graph |
| plotClustersTree | Plot phylogenetic tree clusters as phylogram |
| plotGapStat | Plot gap statistics. |
| runClustPhy | Launch Shiny App for ClustPhy |
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