.Rbuildignore
.Rhistory
.Rproj.user/3D69A0B/build_options
.Rproj.user/3D69A0B/cpp-definition-cache
.Rproj.user/3D69A0B/pcs/debug-breakpoints.pper
.Rproj.user/3D69A0B/pcs/files-pane.pper
.Rproj.user/3D69A0B/pcs/packages-pane.pper
.Rproj.user/3D69A0B/pcs/source-pane.pper
.Rproj.user/3D69A0B/pcs/windowlayoutstate.pper
.Rproj.user/3D69A0B/pcs/workbench-pane.pper
.Rproj.user/3D69A0B/persistent-state
.Rproj.user/3D69A0B/rmd-outputs
.Rproj.user/3D69A0B/saved_source_markers
.Rproj.user/3D69A0B/sources/prop/2416F7D6
.Rproj.user/3D69A0B/sources/prop/272C192A
.Rproj.user/3D69A0B/sources/prop/376430ED
.Rproj.user/3D69A0B/sources/prop/4CC58032
.Rproj.user/3D69A0B/sources/prop/58BBE8E
.Rproj.user/3D69A0B/sources/prop/6B95CB9D
.Rproj.user/3D69A0B/sources/prop/7F29C18B
.Rproj.user/3D69A0B/sources/prop/85060C2
.Rproj.user/3D69A0B/sources/prop/87365F41
.Rproj.user/3D69A0B/sources/prop/97EAA3A8
.Rproj.user/3D69A0B/sources/prop/A8298A2
.Rproj.user/3D69A0B/sources/prop/AD0E58FF
.Rproj.user/3D69A0B/sources/prop/B0A0E3E1
.Rproj.user/3D69A0B/sources/prop/B791217C
.Rproj.user/3D69A0B/sources/prop/BEE98FFB
.Rproj.user/3D69A0B/sources/prop/C885E026
.Rproj.user/3D69A0B/sources/prop/CF80C2FF
.Rproj.user/3D69A0B/sources/prop/CF80E3AB
.Rproj.user/3D69A0B/sources/prop/D369B4D3
.Rproj.user/3D69A0B/sources/prop/D4EEC628
.Rproj.user/3D69A0B/sources/prop/DD46269E
.Rproj.user/3D69A0B/sources/prop/EDE2BE37
.Rproj.user/3D69A0B/sources/prop/F8C6FBC6
.Rproj.user/3D69A0B/sources/prop/FEAFD357
.Rproj.user/3D69A0B/sources/prop/INDEX
.Rproj.user/3D69A0B/sources/s-71DA85B/1616D6A4
.Rproj.user/3D69A0B/sources/s-71DA85B/1616D6A4-contents
.Rproj.user/3D69A0B/sources/s-71DA85B/2CD0EA0A
.Rproj.user/3D69A0B/sources/s-71DA85B/2CD0EA0A-contents
.Rproj.user/3D69A0B/sources/s-71DA85B/68AA2FCD
.Rproj.user/3D69A0B/sources/s-71DA85B/68AA2FCD-contents
.Rproj.user/3D69A0B/sources/s-71DA85B/693D3EA2
.Rproj.user/3D69A0B/sources/s-71DA85B/693D3EA2-contents
.Rproj.user/3D69A0B/sources/s-71DA85B/71AB896
.Rproj.user/3D69A0B/sources/s-71DA85B/71AB896-contents
.Rproj.user/3D69A0B/sources/s-71DA85B/822DD50F
.Rproj.user/3D69A0B/sources/s-71DA85B/822DD50F-contents
.Rproj.user/3D69A0B/sources/s-71DA85B/87208E93
.Rproj.user/3D69A0B/sources/s-71DA85B/87208E93-contents
.Rproj.user/3D69A0B/sources/s-71DA85B/9863A3E
.Rproj.user/3D69A0B/sources/s-71DA85B/9863A3E-contents
.Rproj.user/3D69A0B/sources/s-71DA85B/99BA0540
.Rproj.user/3D69A0B/sources/s-71DA85B/99BA0540-contents
.Rproj.user/3D69A0B/sources/s-71DA85B/A12DD5FD
.Rproj.user/3D69A0B/sources/s-71DA85B/A12DD5FD-contents
.Rproj.user/3D69A0B/sources/s-71DA85B/CF0932DB
.Rproj.user/3D69A0B/sources/s-71DA85B/CF0932DB-contents
.Rproj.user/3D69A0B/sources/s-71DA85B/DDECAA4F
.Rproj.user/3D69A0B/sources/s-71DA85B/DDECAA4F-contents
.Rproj.user/3D69A0B/sources/s-71DA85B/lock_file
.Rproj.user/C94F2E91/cpp-definition-cache
.Rproj.user/C94F2E91/persistent-state
.Rproj.user/C94F2E91/rmd-outputs
.Rproj.user/C94F2E91/saved_source_markers
.Rproj.user/C94F2E91/sources/prop/013698EA
.Rproj.user/C94F2E91/sources/prop/059DF2F3
.Rproj.user/C94F2E91/sources/prop/F5E2DD5D
.Rproj.user/shared/notebooks/patch-chunk-names
.Rproj.user/shared/notebooks/paths
.gitattributes
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/buildtrialdesign.R
R/censordata.R
R/comb.R
R/datadocumentation.R
R/generateData.R
R/generateSimulatedResults.R
R/lme_analysis.R
R/packagedocumentation.R
R/plottingfunctions.R
R/scratch_WorkingScript.R
R/utilities.R
README.md
data/CTdata.rda
data/extracted_bp.rda
data/extracted_rp.rda
data/results_core.rda
data/results_maxes.rda
data/results_rates.rda
data/results_trajectories.rda
man/CTdata.Rd
man/PlotModelingResults.Rd
man/buildtrialdesign.Rd
man/censordata.Rd
man/cumulative.Rd
man/extracted_bp.Rd
man/extracted_rp.Rd
man/generateData.Rd
man/generateSimulatedResults.Rd
man/hello.Rd
man/lme_analysis.Rd
man/modgompertz.Rd
man/plotfactortrajectories.Rd
man/pmsimstats.Rd
man/reknitsimresults.Rd
man/results_core.Rd
man/results_maxes.Rd
man/results_rates.Rd
man/results_trajectories.Rd
pmsimstats.Rproj
vignettes/.gitignore
vignettes/Produce_Publication_Results_1_generate_data.Rmd
vignettes/Produce_Publication_Results_2_Look_at_data.Rmd
vignettes/Produce_Publication_Results_3_apply_to_actual_clinical_trial_data.Rmd
vignettes/coreresults_save1
vignettes/coreresults_save2
vignettes/coreresults_save3