API for rdinnager/fibre
Fast Evolutionary Trait Modelling on Phylogenies using Branch Regression Models
| Global functions | |
|---|---|
| %>% | Man page |
| .data | Man page |
| .onAttach | Source code |
| .onLoad | Source code |
| := | Man page |
| A_zero_out | Source code |
| Q_criterion | Source code |
| as_label | Man page |
| as_name | Man page |
| assert_inla | Source code |
| augment | Man page |
| autoplot | Man page |
| autoplot.fibre | Source code |
| backtick_names | Source code |
| bre | Man page Source code |
| bre_brownian | Man page Source code |
| bre_second_order | Man page Source code |
| check_data_dims | Source code |
| check_inla_dims | Source code |
| compress_data | Source code |
| default_camera | Source code |
| default_light | Source code |
| empty_sparse | Source code |
| enquo | Man page |
| enquos | Man page |
| evo_autodecoder | Man page Source code |
| expand_A_to_y | Source code |
| expand_empty | Source code |
| expand_pfc_to_y | Source code |
| expand_y_to_y | Source code |
| fibre | Man page Man page Source code |
| fibre-package | Man page |
| fibre.data.frame | Man page Source code |
| fibre.default | Man page Source code |
| fibre.formula | Man page Source code |
| fibre.matrix | Man page Source code |
| fibre.recipe | Man page Source code |
| fibre_bridge | Source code |
| fibre_formula_blueprint | Source code |
| fibre_impl | Source code |
| fibre_process_fit_glmnet | Source code |
| fibre_process_fit_glmnet_lambda | Source code |
| fibre_process_fit_inla | Source code |
| fibre_rates | Source code |
| get_aces | Man page Source code |
| get_camera_position | Source code |
| get_camera_transform | Source code |
| get_families | Source code |
| get_fibre_predict_function | Source code |
| get_marg_samps | Source code |
| get_points_in_unit_sphere | Source code |
| get_rates | Man page Source code |
| get_rotation_matrix | Source code |
| get_shadows | Source code |
| get_tces | Man page Source code |
| get_tips | Man page Source code |
| get_vars | Source code |
| glance | Man page |
| glmnet_metrics | Source code |
| load_bird_beak_model | Source code |
| load_model | Man page Source code |
| make_inla_formula | Source code |
| make_latent_copy | Source code |
| make_latent_data | Source code |
| make_latent_y | Source code |
| make_y_data | Source code |
| map_cat | Source code |
| na_fill | Source code |
| new_fibre | Source code |
| new_fibre_formula_blueprint | Source code |
| norm_vec | Source code |
| parse_formula_for_mold | Source code |
| plot_params | Source code |
| predict.fibre | Man page Source code |
| predict_fibre_bridge | Source code |
| predict_fibre_numeric | Source code |
| print.fibre | Source code |
| prior_basic | Source code |
| prior_brownian | Source code |
| projection_matrix | Source code |
| re | Man page Source code |
| reexports | Man page |
| refresh_blueprint.fibre_formula_blueprint | Source code |
| render_image | Source code |
| render_silhouette | Source code |
| resid_sig | Source code |
| run_forge.fibre_formula_blueprint | Source code |
| run_mold.fibre_formula_blueprint | Source code |
| sdf_net | Man page |
| set_env | Source code |
| setup_render | Source code |
| shape_data_glmnet | Source code |
| shape_data_inla | Source code |
| shape_data_preprocess | Source code |
| simulate_traits | Man page Source code |
| spark_dotplot | Source code |
| spark_hist_with_padding | Source code |
| tibble_block | Source code |
| tidy | Man page |
| tidy.fibre | Man page Source code |
| tidy_marginal | Source code |
| tidyeval | Man page |
| tmarginal_list | Source code |
| tree_split_into_epochs | Source code |
| valid_fibre_predict_types | Source code |
