API for reichlab/cdcfluutils
Utility functions for CDC flu forecasts for team Kernel of Truth
| Global functions | |
|---|---|
| ILI_revision_tables | Man page |
| assemble_predictions | Man page Source code |
| assemble_stacking_inputs | Man page Source code |
| calc_median_from_binned_probs | Man page Source code |
| cdcfluutils | Man page |
| cdcfluutils-package | Man page |
| compute_competition_log_score | Man page Source code |
| create_ILI_revision_tables | Man page Source code |
| download_and_preprocess_flu_data | Man page Source code |
| download_and_preprocess_hosp_data | Man page Source code |
| download_and_preprocess_state_flu_data | Man page Source code |
| fetch_delphi_data_multi_issue | Man page Source code |
| first_season_week_below_baseline | Man page Source code |
| fit_hosp_sarima | Source code Source code |
| fit_kde_log_peak_week_inc | Man page Source code |
| fit_kde_onset_week | Man page Source code |
| fit_kde_peak_week | Man page Source code |
| fit_kde_weekly_inc | Man page Source code |
| fit_kernel_smoothed_stacked_model_fixed_bw | Man page Source code |
| fit_region_kdes | Man page Source code |
| fit_region_sarima | Man page Source code |
| fit_stacked_model | Man page Source code |
| fit_unregularized_stacked_model | Man page Source code |
| flu_data | Man page |
| flu_onset_baselines | Man page |
| get_inc_bin | Man page Source code |
| get_num_MMWR_weeks_in_first_season_year | Man page Source code |
| get_num_MMWR_weeks_in_year | Man page Source code |
| get_observed_seasonal_quantities | Man page Source code |
| get_official_observed_seasonal_quantities | Man page Source code |
| get_onset_baseline | Man page Source code |
| get_onset_week | Man page Source code |
| get_partially_revised_ilinet | Man page Source code |
| get_predx_forecasts_from_trajectory_samples | Source code |
| get_submission_one_region_via_trajectory_simulation | Man page Source code |
| historical_vars_regional | Man page |
| logspace_add | Man page Source code |
| logspace_sub | Man page Source code |
| logspace_sub_matrix_rows | Man page Source code |
| logspace_sum | Man page Source code |
| logspace_sum_matrix_rows | Man page Source code |
| make_kde_region_prediction | Man page Source code |
| make_one_kde_prediction_file | Man page Source code |
| make_predictions_plots | Man page Source code |
| merge_predx_samples | Man page Source code |
| mmwr_week_to_season | Man page Source code |
| mmwr_week_to_season_week | Man page Source code |
| move_k_week_ahead | Man page Source code |
| my_plot_weekahead | Man page Source code |
| nat_reg_flu_data_with_backfill | Man page |
| pick_week | Man page Source code |
| predict_kde_log_peak_week_inc | Man page Source code |
| predict_kde_log_weekly_inc | Man page Source code |
| predict_kde_onset_week | Man page Source code |
| predict_kde_peak_week | Man page Source code |
| predict_region_kde | Man page Source code |
| predx_to_submission_df | Man page Source code |
| preprocess_and_augment_trajectory_samples | Man page Source code |
| preprocess_reg_data_for_GPthingy_stan | Man page Source code |
| rRevisedILI | Man page Source code |
| rRevisedILI_cached | Man page Source code |
| rRevisedILI_fast | Man page Source code |
| sample_predictive_trajectories_arima_wrapper | Man page Source code |
| season_week_to_mmwr_year | Man page Source code |
| season_week_to_year_week | Man page Source code |
| simulate_trajectories_kcde | Man page Source code |
| state_flu_data | Man page |
| to_standard_location_code | Man page Source code |
| weighted_combine_predictions | Man page Source code |
| year_week_to_season_week | Man page Source code |
