Man pages for reichlab/covidData
Versioned Data for COVID-19

adjust_daily_incidenceRedistribute difference between the original observation and...
available_issue_datesGet all available truth data issue dates
build_healthdata_dataConstruct a merged healthdata data set for a single issue...
calc_jhu_global_cumPreprocess JHU global data to get regional counts
covidDatacovidData - Versioned data for COVID-19
download_healthdata_dailyrevisionDownload daily revision data at a specific issue date
download_healthdata_timeseriesDownload time series data at a specific issue date
fill_naReplace daily inc with NA in specific rows
fips_codesFIPS codes for the US and its states and territories
get_negative_casesFind all observations with negative incidence in a given data...
get_time_series_data_linkAssemble a data frame that stores all links to JHU data...
global_locationsAvailable global locations in JHU
healthdata_dailyrevision_historyRetrieve hosp daily revision data update history from...
healthdata_hosp_early_datadata frame for hosp time series data before 2021-03-12
healthdata_timeseries_historyRetrieve hosp time series data update history from...
identify_outliersIdentify outliers and suitable replacement values
impute_daily_incidenceImputed incidence value for the single day with reporting...
jhu_cases_imputed_dataimputed cases incidence data for negative incidence and...
jhu_deaths_imputed_dataImputed death incidence data for negative incidence and...
jhu_global_cases_data_linksdata frame for JHU global cases time series data links
jhu_global_deaths_data_linksdata frame for JHU global deaths time series data links
jhu_us_cases_data_linksdata frame for JHU US cases time series data links
jhu_us_deaths_data_linksdata frame for JHU US deaths time series data links
load_covidcast_dataAssemble a data frame of incident hospitalizations due to...
load_dataAssemble a data frame of incident and cumulative cases,...
load_healthdata_dataAssemble a data frame of incident hospitalizations due to...
load_jhu_dataAssemble a data frame of incident and cumulative deaths or...
preprocess_healthdata_dataPreprocess healthdata data set, calculating incidence,...
preprocess_jhu_dataCreate a tibble of incident and cumulative deaths or cases...
replace_negativesReplace negative incidence with imputed data and redistribute...
reichlab/covidData documentation built on April 5, 2024, 5 p.m.