Man pages for rformassspectrometry/PSMatch
Handling and Managing Peptide Spectrum Matches

adjacencyMatrixConvert to/from an adjacency matrix.
calculateFragmentsCalculate ions produced by fragmentation with variable...
ConnectedComponentsConnected components
describeProteinsDescribe protein and peptide compositions
filterPSMsFilter out unreliable PSMs.
getAminoAcidsAmino acids
getAtomicMassAtomic mass.
labelFragmentslabels MS2 Fragments
plotSpectraPTMFunction to plot MS/MS spectra with PTMs
PSMA class for peptide-spectrum matches
PSMatchPSMatch: Handling and Managing Peptide Spectrum Matches
rformassspectrometry/PSMatch documentation built on June 1, 2025, 2:47 p.m.