API for rformassspectrometry/ProtGenerics
Generic infrastructure for Bioconductor mass spectrometry packages
| Global functions | |
|---|---|
| .cat_fun | Source code |
| Param | Man page |
| Param-class | Man page |
| ProcessingStep | Man page Source code |
| ProcessingStep-class | Man page |
| ProtGenerics | Man page |
| ProtGenerics-package | Man page |
| accessions | Man page |
| acquisitionNum | Man page |
| addProcessing | Man page |
| adjacencyMatrix | Man page |
| aggregateFeatures | Man page |
| alignRt | Man page |
| analyser | Man page |
| analyserDetails | Man page |
| analyzer | Man page |
| analyzerDetails | Man page |
| as.list,Param-method | Man page |
| backendBpparam | Man page |
| backendInitialize | Man page |
| backendMerge | Man page |
| backendParallelFactor | Man page |
| bin | Man page |
| calculateFragments | Man page |
| centroided | Man page |
| centroided<- | Man page |
| characterOrFunction-class | Man page |
| chromatogram | Man page |
| chromatograms | Man page |
| collisionEnergy | Man page |
| collisionEnergy<- | Man page |
| combineFeatures | Man page |
| compareChromatograms | Man page |
| compareSpectra | Man page |
| compounds | Man page |
| dataOrigin | Man page |
| dataOrigin<- | Man page |
| dataStorage | Man page |
| dataStorage<- | Man page |
| database | Man page |
| detectorType | Man page |
| estimatePrecursorIntensity | Man page |
| executeProcessingStep | Man page Source code |
| expemail | Man page |
| exptitle | Man page |
| extractByIndex | Man page |
| filterAcquisitionNum | Man page |
| filterDataOrigin | Man page |
| filterDataStorage | Man page |
| filterEmptySpectra | Man page |
| filterFeatures | Man page |
| filterIntensity | Man page |
| filterIsolationWindow | Man page |
| filterMsLevel | Man page |
| filterMz | Man page |
| filterMzRange | Man page |
| filterMzValues | Man page |
| filterNA | Man page |
| filterPolarity | Man page |
| filterPrecursorCharge | Man page |
| filterPrecursorMz | Man page |
| filterPrecursorMzRange | Man page |
| filterPrecursorMzValues | Man page |
| filterPrecursorScan | Man page |
| filterProductMz | Man page |
| filterProductMzRange | Man page |
| filterProductMzValues | Man page |
| filterRanges | Man page |
| filterRt | Man page |
| filterSpectra | Man page |
| filterValues | Man page |
| impute | Man page |
| instrumentCustomisations | Man page |
| instrumentManufacturer | Man page |
| instrumentModel | Man page |
| intensity | Man page |
| intensity<- | Man page |
| ionCount | Man page |
| ionSource | Man page |
| ionSourceDetails | Man page |
| ions | Man page |
| isCentroided | Man page |
| isReadOnly | Man page |
| isolationWindowLowerMz | Man page |
| isolationWindowLowerMz<- | Man page |
| isolationWindowTargetMz | Man page |
| isolationWindowTargetMz<- | Man page |
| isolationWindowUpperMz | Man page |
| isolationWindowUpperMz<- | Man page |
| mass | Man page |
| modifications | Man page |
| msInfo | Man page |
| msLevel | Man page |
| msLevel<- | Man page |
| mz | Man page |
| mz<- | Man page |
| peaks | Man page |
| peaks<- | Man page |
| peaksData | Man page |
| peaksData<- | Man page |
| peaksVariables | Man page |
| peptides | Man page |
| polarity | Man page |
| polarity<- | Man page |
| precAcquisitionNum | Man page |
| precScanNum | Man page |
| precursorCharge | Man page |
| precursorCharge<- | Man page |
| precursorIntensity | Man page |
| precursorIntensity<- | Man page |
| precursorMz | Man page |
| precursorMz<- | Man page |
| processingData | Man page |
| processingData<- | Man page |
| productMz | Man page |
| productMz<- | Man page |
| proteins | Man page |
| psms | Man page |
| quantify | Man page |
| rtime | Man page |
| rtime<- | Man page |
| scanIndex | Man page |
| scans | Man page |
| setBackend | Man page |
| show,Param-method | Man page |
| show,ProcessingStep-method | Man page |
| smooth | Man page |
| smoothed | Man page |
| smoothed<- | Man page |
| spectra | Man page |
| spectra<- | Man page |
| spectraData | Man page |
| spectraData<- | Man page |
| spectraNames | Man page |
| spectraNames<- | Man page |
| spectraVariables | Man page |
| spectrapply | Man page |
| supportsSetBackend | Man page |
| tic | Man page |
| tolerance | Man page |
| uniqueMsLevels | Man page |
| writeMSData | Man page |
