API for rhenkin/clinvisx
A Configurable 'shiny' Portal for Sharing Analysis of Molecular Expression Data
| Global functions | |
|---|---|
| .includeMarkdown | Source code |
| add_cohort_overview | Source code |
| add_heatmap | Source code |
| add_knitr_table | Source code |
| add_resource_path | Source code |
| advanced_settings_inputs | Source code |
| app_server | Source code |
| app_sys | Source code |
| app_ui | Source code |
| appendToURL | Source code |
| appendToURLv | Source code |
| bg_color | Source code |
| buildURL | Source code |
| bundle_resources | Source code |
| call_module | Source code |
| characterURL | Source code |
| characterURLsub | Source code |
| checkModuleExists | Source code |
| cohortOverview_config | Source code |
| cohortOverview_tab | Source code |
| col_1 | Source code |
| col_10 | Source code |
| col_12 | Source code |
| col_2 | Source code |
| col_3 | Source code |
| col_4 | Source code |
| col_6 | Source code |
| col_8 | Source code |
| compareTrajGroups_config | Source code |
| compareTrajGroups_tab | Source code |
| compute_pval | Source code |
| corrModules_config | Source code |
| corrResultsToTable | Source code |
| correlateMatrices | Source code |
| correlationResultsToLong | Source code |
| create_config_template | Man page Source code |
| create_config_wizard | Man page Source code |
| create_example | Man page Source code |
| create_lookup | Source code |
| create_module_template | Man page Source code |
| custom_add_col_annotations | Source code |
| degDetails_config | Source code |
| degDetails_tab | Source code |
| degModules_config | Source code |
| degSummary_config | Source code |
| degSummary_tab | Source code |
| dev_module_server | Source code |
| dev_module_ui | Source code |
| display | Source code |
| encoding_list | Source code |
| enurl | Source code |
| fast_cor | Source code |
| favicon | Source code |
| file_ext | Source code |
| file_path | Source code |
| geneModulesHeatmap_config | Source code |
| geneModulesHeatmap_tab | Source code |
| geneProjectionOverlay_config | Source code |
| geneProjectionOverlay_tab | Source code |
| geneSelectInput | Source code |
| getSelectedSampleCategories | Source code |
| get_golem_config | Source code |
| get_opts | Source code |
| golem_add_external_resources | Source code |
| itemURL | Source code |
| jq_hide | Source code |
| list_to_li | Source code |
| list_to_p | Source code |
| loadModels | Source code |
| longCorrelationMatrix | Source code |
| mod_cohortOverview_server | Source code |
| mod_cohortOverview_ui | Source code |
| mod_compareTrajGroups_server | Source code |
| mod_compareTrajGroups_ui | Source code |
| mod_corrModules_server | Source code |
| mod_corrModules_ui | Source code |
| mod_degDetails_server | Source code |
| mod_degDetails_ui | Source code |
| mod_degModules_server | Source code |
| mod_degModules_ui | Source code |
| mod_degSummary_server | Source code |
| mod_degSummary_ui | Source code |
| mod_geneModulesHeatmap_server | Source code |
| mod_geneModulesHeatmap_ui | Source code |
| mod_geneProjectionOverlay_server | Source code |
| mod_geneProjectionOverlay_ui | Source code |
| mod_multiMeasureCorr_server | Source code |
| mod_multiMeasureCorr_ui | Source code |
| mod_singleGeneCorr_server | Source code |
| mod_singleGeneCorr_ui | Source code |
| mod_singleMeasureCorr_server | Source code |
| mod_singleMeasureCorr_ui | Source code |
| multiMeasureCorr_config | Source code |
| multiMeasureCorr_tab | Source code |
| named_to_li | Source code |
| outlier_functions | Source code |
| outlier_inputs | Source code |
| parseConfig | Source code |
| plotsTabPanels | Source code |
| prepareModelResultsTable | Source code |
| read_file | Source code |
| remove_duplicate_subjects | Source code |
| rep_br | Source code |
| replaceFalseWithNA | Source code |
| run_app | Man page Source code |
| run_module | Source code |
| sampleCategoryInputs | Source code |
| selectFromLookup | Source code |
| selectMatchingMultipleValues | Source code |
| selectMatchingValues | Source code |
| show_available_modules | Man page Source code |
| singleGeneCorr_config | Source code |
| singleGeneCorr_tab | Source code |
| singleMeasureCorr_config | Source code |
| singleMeasureCorr_tab | Source code |
| stopIfNotInstalled | Source code |
| stop_nice | Source code |
| tagRemoveAttributes | Source code |
| undisplay | Source code |
| urlAsTag | Source code |
| urlVector | Source code |
| validateAdvancedSettings | Source code |
| validateData | Source code |
| valuesInsideQuantileRange | Source code |
| valuesInsideTukeyFences | Source code |
| valuesToURL | Source code |
| varsSelectInput | Source code |
| vega_add_fitline | Source code |
| vega_heatmap | Source code |
| vega_layer_scatterplot | Source code |
| vega_scatterplot_overlay | Source code |
| vega_traj_scatterplot | Source code |
| vega_volcanoplot | Source code |
| with_red_star | Source code |
