| add_adjustment |
Source code
|
| add_attributes |
Source code
|
| add_cols |
Source code
|
| add_efficacious |
Source code
|
| add_link_attr |
Source code
|
| add_long_hyperparms |
Source code
|
| add_mcmc_attributes |
Source code
|
| add_mcmc_attributes.default |
Source code
|
| add_mcmc_attributes.dreamer_beta |
Source code
|
| add_mcmc_attributes.dreamer_beta_binary |
Source code
|
| add_mcmc_attributes.dreamer_binary |
Source code
|
| add_mcmc_class |
Source code
|
| add_mcmc_class.dreamer_beta |
Source code
|
| add_mcmc_class.dreamer_beta_binary |
Source code
|
| add_mcmc_class.dreamer_emax |
Source code
|
| add_mcmc_class.dreamer_emax_binary |
Source code
|
| add_mcmc_class.dreamer_exp |
Source code
|
| add_mcmc_class.dreamer_exp_binary |
Source code
|
| add_mcmc_class.dreamer_independent_binary |
Source code
|
| add_mcmc_class.dreamer_independent_continuous |
Source code
|
| add_mcmc_class.dreamer_linear |
Source code
|
| add_mcmc_class.dreamer_linear_binary |
Source code
|
| add_mcmc_class.dreamer_loglinear |
Source code
|
| add_mcmc_class.dreamer_loglinear_binary |
Source code
|
| add_mcmc_class.dreamer_logquad |
Source code
|
| add_mcmc_class.dreamer_logquad_binary |
Source code
|
| add_mcmc_class.dreamer_quad |
Source code
|
| add_mcmc_class.dreamer_quad_binary |
Source code
|
| add_model_name |
Source code
|
| add_model_name_attr |
Source code
|
| add_reference_dose |
Source code
|
| add_time_to_title |
Source code
|
| aggregate_binary |
Source code
|
| aggregate_data |
Source code
|
| any_independent |
Source code
|
| any_independent.default |
Source code
|
| any_independent.dreamer_bma |
Source code
|
| assert_binary_dots |
Source code
|
| assert_data_reference_dose |
Source code
|
| assert_dose_len |
Source code
|
| assert_doses |
Source code
|
| assert_dreamer_dots |
Source code
|
| assert_independent_dots |
Source code
|
| assert_model_names |
Source code
|
| assert_names |
Source code
|
| assert_no_dots |
Source code
|
| assert_reference_dose |
Source code
|
| assert_w_prior |
Source code
|
| bar_width |
Source code
|
| base_dreamer_plot |
Source code
|
| base_dreamer_plot_error_bar |
Source code
|
| base_dreamer_predictive_plot |
Source code
|
| calc_post_medx_samps |
Source code
|
| check_aggregate |
Source code
|
| check_binary |
Source code
|
| check_bounds |
Source code
|
| check_colnames |
Source code
|
| check_data |
Source code
|
| check_dose_index |
Source code
|
| check_dose_length |
Source code
|
| check_doses_data |
Source code
|
| check_duplicate_dose |
Source code
|
| check_ind_model_parms |
Source code
|
| check_independent_doses |
Source code
|
| check_independent_model |
Source code
|
| check_len |
Source code
|
| check_link |
Source code
|
| check_longitudinal |
Source code
|
| check_names |
Source code
|
| check_no_dots |
Source code
|
| check_plot |
Source code
|
| check_seed_len |
Source code
|
| check_small_bound |
Source code
|
| check_small_bound2 |
Source code
|
| check_time |
Source code
|
| check_times |
Source code
|
| common_attributes |
Source code
|
| convergence_warnings |
Source code
|
| create_jags_model |
Source code
|
| diagnostics |
Man page
Source code
|
| diagnostics.dreamer_bma |
Source code
|
| diagnostics.dreamer_mcmc |
Source code
|
| do_call |
Source code
|
| dreamer_data |
Man page
|
| dreamer_data_beta |
Man page
Source code
|
| dreamer_data_beta_binary |
Man page
Source code
|
| dreamer_data_emax |
Man page
Source code
|
| dreamer_data_emax_binary |
Man page
Source code
|
| dreamer_data_exp |
Man page
Source code
|
| dreamer_data_exp_binary |
Man page
Source code
|
| dreamer_data_independent |
Man page
Source code
|
| dreamer_data_independent_binary |
Man page
Source code
|
| dreamer_data_linear |
Man page
Source code
|
| dreamer_data_linear_binary |
Man page
Source code
|
| dreamer_data_loglinear |
Man page
Source code
|
| dreamer_data_loglinear_binary |
Man page
Source code
|
| dreamer_data_logquad |
Man page
Source code
|
| dreamer_data_logquad_binary |
Man page
Source code
|
| dreamer_data_quad |
Man page
Source code
|
| dreamer_data_quad_binary |
Man page
Source code
|
| dreamer_mcmc |
Man page
Source code
|
| dreamer_mean |
Source code
|
| dreamer_mean.dreamer_mcmc_beta |
Source code
|
| dreamer_mean.dreamer_mcmc_beta_binary |
Source code
|
| dreamer_mean.dreamer_mcmc_emax |
Source code
|
| dreamer_mean.dreamer_mcmc_emax_binary |
Source code
|
| dreamer_mean.dreamer_mcmc_exp |
Source code
|
| dreamer_mean.dreamer_mcmc_exp_binary |
Source code
|
| dreamer_mean.dreamer_mcmc_independent |
Source code
|
| dreamer_mean.dreamer_mcmc_independent_binary |
Source code
|
| dreamer_mean.dreamer_mcmc_linear |
Source code
|
| dreamer_mean.dreamer_mcmc_linear_binary |
Source code
|
| dreamer_mean.dreamer_mcmc_loglinear |
Source code
|
| dreamer_mean.dreamer_mcmc_loglinear_binary |
Source code
|
| dreamer_mean.dreamer_mcmc_logquad |
Source code
|
| dreamer_mean.dreamer_mcmc_logquad_binary |
Source code
|
| dreamer_mean.dreamer_mcmc_quad |
Source code
|
| dreamer_mean.dreamer_mcmc_quad_binary |
Source code
|
| dreamer_mean_beta |
Source code
|
| dreamer_mean_emax |
Source code
|
| dreamer_mean_exp |
Source code
|
| dreamer_mean_independent |
Source code
|
| dreamer_mean_linear |
Source code
|
| dreamer_mean_loglinear |
Source code
|
| dreamer_mean_logquad |
Source code
|
| dreamer_mean_longitudinal_mcmc |
Source code
|
| dreamer_mean_quad |
Source code
|
| dreamer_plot_prior |
Man page
Source code
|
| dreamer_post_weights |
Source code
|
| dreamerplot |
Man page
|
| epll |
Source code
|
| expand_mean_time |
Source code
|
| fit_model |
Source code
|
| get_args |
Source code
|
| get_base_data |
Source code
|
| get_data |
Source code
|
| get_dose |
Source code
|
| get_dose.dreamer_mcmc_beta |
Source code
|
| get_dose.dreamer_mcmc_beta_binary |
Source code
|
| get_dose.dreamer_mcmc_emax |
Source code
|
| get_dose.dreamer_mcmc_emax_binary |
Source code
|
| get_dose.dreamer_mcmc_exp |
Source code
|
| get_dose.dreamer_mcmc_exp_binary |
Source code
|
| get_dose.dreamer_mcmc_linear |
Source code
|
| get_dose.dreamer_mcmc_linear_binary |
Source code
|
| get_dose.dreamer_mcmc_loglinear |
Source code
|
| get_dose.dreamer_mcmc_loglinear_binary |
Source code
|
| get_dose.dreamer_mcmc_logquad |
Source code
|
| get_dose.dreamer_mcmc_logquad_binary |
Source code
|
| get_dose.dreamer_mcmc_quad |
Source code
|
| get_dose.dreamer_mcmc_quad_binary |
Source code
|
| get_doses |
Source code
|
| get_eoi_grid |
Source code
|
| get_epll |
Source code
|
| get_extreme |
Source code
|
| get_extreme.default |
Source code
|
| get_extreme.dreamer_mcmc_beta |
Source code
|
| get_extreme.dreamer_mcmc_independent |
Source code
|
| get_extreme.dreamer_mcmc_logquad |
Source code
|
| get_extreme.dreamer_mcmc_quad |
Source code
|
| get_extreme_monotonic |
Source code
|
| get_hyparms |
Source code
|
| get_inequality_func |
Source code
|
| get_jags_code |
Source code
|
| get_jags_data |
Source code
|
| get_jags_data_hyperparms |
Source code
|
| get_jags_data_hyperparms.default |
Source code
|
| get_jags_data_hyperparms.dreamer_independent |
Source code
|
| get_jags_like_file |
Source code
|
| get_jags_like_file.dreamer_beta |
Source code
|
| get_jags_like_file.dreamer_beta_binary |
Source code
|
| get_jags_like_file.dreamer_emax |
Source code
|
| get_jags_like_file.dreamer_emax_binary |
Source code
|
| get_jags_like_file.dreamer_exp |
Source code
|
| get_jags_like_file.dreamer_exp_binary |
Source code
|
| get_jags_like_file.dreamer_independent_binary |
Source code
|
| get_jags_like_file.dreamer_independent_continuous |
Source code
|
| get_jags_like_file.dreamer_linear |
Source code
|
| get_jags_like_file.dreamer_linear_binary |
Source code
|
| get_jags_like_file.dreamer_loglinear |
Source code
|
| get_jags_like_file.dreamer_loglinear_binary |
Source code
|
| get_jags_like_file.dreamer_logquad |
Source code
|
| get_jags_like_file.dreamer_logquad_binary |
Source code
|
| get_jags_like_file.dreamer_quad |
Source code
|
| get_jags_like_file.dreamer_quad_binary |
Source code
|
| get_jags_model |
Source code
|
| get_jags_prior_file |
Source code
|
| get_jags_prior_file.dreamer_beta |
Source code
|
| get_jags_prior_file.dreamer_beta_binary |
Source code
|
| get_jags_prior_file.dreamer_emax |
Source code
|
| get_jags_prior_file.dreamer_emax_binary |
Source code
|
| get_jags_prior_file.dreamer_exp |
Source code
|
| get_jags_prior_file.dreamer_exp_binary |
Source code
|
| get_jags_prior_file.dreamer_independent_binary |
Source code
|
| get_jags_prior_file.dreamer_independent_continuous |
Source code
|
| get_jags_prior_file.dreamer_linear |
Source code
|
| get_jags_prior_file.dreamer_linear_binary |
Source code
|
| get_jags_prior_file.dreamer_loglinear |
Source code
|
| get_jags_prior_file.dreamer_loglinear_binary |
Source code
|
| get_jags_prior_file.dreamer_logquad |
Source code
|
| get_jags_prior_file.dreamer_logquad_binary |
Source code
|
| get_jags_prior_file.dreamer_quad |
Source code
|
| get_jags_prior_file.dreamer_quad_binary |
Source code
|
| get_jags_seed |
Source code
|
| get_long_model |
Source code
|
| get_long_prior |
Source code
|
| get_longitudinal_likelihood_file |
Source code
|
| get_longitudinal_likelihood_file.dreamer_longitudinal_idp |
Source code
|
| get_longitudinal_likelihood_file.dreamer_longitudinal_itp |
Source code
|
| get_longitudinal_likelihood_file.dreamer_longitudinal_linear |
Source code
|
| get_longitudinal_prior_file |
Source code
|
| get_longitudinal_prior_file.dreamer_longitudinal_idp |
Source code
|
| get_longitudinal_prior_file.dreamer_longitudinal_itp |
Source code
|
| get_longitudinal_prior_file.dreamer_longitudinal_linear |
Source code
|
| get_longitudinal_vnames |
Source code
|
| get_longitudinal_vnames.default |
Source code
|
| get_longitudinal_vnames.dreamer_longitudinal_idp |
Source code
|
| get_longitudinal_vnames.dreamer_longitudinal_itp |
Source code
|
| get_longitudinal_vnames.dreamer_longitudinal_linear |
Source code
|
| get_mcmc_index |
Source code
|
| get_med |
Source code
|
| get_min_dose |
Source code
|
| get_min_na |
Source code
|
| get_model_index |
Source code
|
| get_n_params |
Source code
|
| get_n_params.dreamer_mcmc_beta |
Source code
|
| get_n_params.dreamer_mcmc_beta_binary |
Source code
|
| get_n_params.dreamer_mcmc_emax |
Source code
|
| get_n_params.dreamer_mcmc_emax_binary |
Source code
|
| get_n_params.dreamer_mcmc_exp |
Source code
|
| get_n_params.dreamer_mcmc_exp_binary |
Source code
|
| get_n_params.dreamer_mcmc_independent |
Source code
|
| get_n_params.dreamer_mcmc_independent_binary |
Source code
|
| get_n_params.dreamer_mcmc_linear |
Source code
|
| get_n_params.dreamer_mcmc_linear_binary |
Source code
|
| get_n_params.dreamer_mcmc_loglinear |
Source code
|
| get_n_params.dreamer_mcmc_loglinear_binary |
Source code
|
| get_n_params.dreamer_mcmc_logquad |
Source code
|
| get_n_params.dreamer_mcmc_logquad_binary |
Source code
|
| get_n_params.dreamer_mcmc_quad |
Source code
|
| get_n_params.dreamer_mcmc_quad_binary |
Source code
|
| get_n_params_longitudinal |
Source code
|
| get_post_mean_samps |
Source code
|
| get_progress_bar |
Source code
|
| get_response_type |
Source code
|
| get_scale |
Source code
|
| get_sum_log_probs |
Source code
|
| get_time |
Source code
|
| get_time_var |
Source code
|
| get_title |
Source code
|
| get_title_error_bars |
Source code
|
| get_vnames |
Source code
|
| get_vnames_model |
Source code
|
| get_vnames_model.dreamer_beta |
Source code
|
| get_vnames_model.dreamer_beta_binary |
Source code
|
| get_vnames_model.dreamer_emax |
Source code
|
| get_vnames_model.dreamer_emax_binary |
Source code
|
| get_vnames_model.dreamer_exp |
Source code
|
| get_vnames_model.dreamer_exp_binary |
Source code
|
| get_vnames_model.dreamer_independent_binary |
Source code
|
| get_vnames_model.dreamer_independent_continuous |
Source code
|
| get_vnames_model.dreamer_linear |
Source code
|
| get_vnames_model.dreamer_linear_binary |
Source code
|
| get_vnames_model.dreamer_loglinear |
Source code
|
| get_vnames_model.dreamer_loglinear_binary |
Source code
|
| get_vnames_model.dreamer_logquad |
Source code
|
| get_vnames_model.dreamer_logquad_binary |
Source code
|
| get_vnames_model.dreamer_quad |
Source code
|
| get_vnames_model.dreamer_quad_binary |
Source code
|
| get_w_prior |
Source code
|
| get_y |
Source code
|
| ilogit |
Source code
|
| iprobit |
Source code
|
| load_jags_modules |
Source code
|
| logit |
Source code
|
| make_predictive_binary |
Source code
|
| make_predictive_continuous |
Source code
|
| make_reference_dose |
Source code
|
| mcmc_end_msg |
Source code
|
| mcmc_start_msg |
Source code
|
| model |
Man page
|
| model_beta |
Man page
Source code
|
| model_beta_binary |
Man page
Source code
|
| model_emax |
Man page
Source code
|
| model_emax_binary |
Man page
Source code
|
| model_exp |
Man page
Source code
|
| model_exp_binary |
Man page
Source code
|
| model_independent |
Man page
Source code
|
| model_independent_binary |
Man page
Source code
|
| model_linear |
Man page
Source code
|
| model_linear_binary |
Man page
Source code
|
| model_loglinear |
Man page
Source code
|
| model_loglinear_binary |
Man page
Source code
|
| model_logquad |
Man page
Source code
|
| model_logquad_binary |
Man page
Source code
|
| model_longitudinal |
Man page
|
| model_longitudinal_idp |
Man page
Source code
|
| model_longitudinal_itp |
Man page
Source code
|
| model_longitudinal_linear |
Man page
Source code
|
| model_quad |
Man page
Source code
|
| model_quad_binary |
Man page
Source code
|
| new_min |
Source code
|
| pextreme |
Source code
|
| plot.dreamer_mcmc |
Man page
Source code
|
| plot_comparison |
Man page
Source code
|
| plot_comparison.default |
Man page
Source code
|
| plot_comparison.dreamer_bma |
Man page
Source code
|
| plot_comparison_worker |
Source code
|
| plot_data |
Source code
|
| plot_longitudinal |
Source code
|
| plot_trace |
Man page
Source code
|
| plot_trace.dreamer_bma |
Source code
|
| plot_trace.dreamer_mcmc |
Source code
|
| post_medx |
Man page
Source code
|
| post_medx.dreamer_bma |
Man page
Source code
|
| post_medx.dreamer_mcmc |
Man page
Source code
|
| post_medx.dreamer_mcmc_independent |
Source code
|
| post_medx.dreamer_mcmc_independent_binary |
Source code
|
| post_perc_effect |
Man page
Source code
|
| post_perc_effect.dreamer_bma |
Man page
Source code
|
| post_perc_effect.dreamer_mcmc |
Man page
Source code
|
| post_weights |
Source code
|
| posterior |
Man page
Source code
|
| posterior.default |
Source code
|
| posterior.dreamer_bma |
Man page
Source code
|
| posterior.dreamer_mcmc |
Man page
Source code
|
| posterior.dreamer_mcmc_independent |
Man page
Source code
|
| pr_eoi |
Man page
Source code
|
| pr_eoi_impl |
Source code
|
| pr_med |
Man page
Source code
|
| pr_medx |
Man page
Source code
|
| prep_binary_jags_data |
Source code
|
| prep_cont_jags_data |
Source code
|
| prep_jags_data |
Source code
|
| prep_jags_data.dreamer_beta |
Source code
|
| prep_jags_data.dreamer_beta_binary |
Source code
|
| prep_jags_data.dreamer_binary |
Source code
|
| prep_jags_data.dreamer_continuous |
Source code
|
| prep_jags_data.dreamer_independent_binary |
Source code
|
| prep_jags_data.dreamer_independent_continuous |
Source code
|
| prep_weight_data |
Source code
|
| print.dreamer_binary |
Source code
|
| print.dreamer_bma |
Source code
|
| print.dreamer_continuous |
Source code
|
| print.dreamer_mcmc |
Source code
|
| print_model |
Source code
|
| probit |
Source code
|
| quantile_custom |
Source code
|
| remove_scale |
Source code
|
| remove_t_max |
Source code
|
| remove_t_max.default |
Source code
|
| remove_t_max.dreamer_longitudinal_idp |
Source code
|
| restore_jags_modules |
Source code
|
| return_stats_samps |
Source code
|
| rjags_setup |
Source code
|
| run_jags_model |
Source code
|
| set_a |
Source code
|
| set_a_jags |
Source code
|
| set_link |
Source code
|
| set_scale |
Source code
|
| solve_quad |
Source code
|
| subset_mcmc |
Source code
|
| summarize_medx |
Source code
|
| summarize_post_perc |
Source code
|
| summarize_samples |
Source code
|
| summarize_samples_binary |
Source code
|
| summarize_samples_continuous |
Source code
|
| summary.dreamer_bma |
Man page
Source code
|
| summary.dreamer_mcmc |
Man page
Source code
|
| throw_convergence_warn |
Source code
|
