Man pages for ricoderks/lipidomics
Lipidomics workflow

box_plot	Create box plot
bubble_plot	Create bubble plot
bubblePlotServer	Create bubble plot server part
bubblePlotUI	Create bubble plot UI
calc_blank_ratio	Calculate the sample to average blank ratio
calc_rsd	Calculate RSD values of all lipids
clean_up	Clean up tibble from MS-DIAL
compare_samples_heatmap	Create correlation heatmap of all samples
cor_heatmap	Create correlation heatmap of all samples
do_mwtest	Do a Mann-Whitney U test on all lipids
do_pca	Do PCA analysis
do_stat_test	Do a statitical test
do_ttest	Do a t-test on all lipids
launchApp	launches the shiny app
load_to_env	Load to environment
merge_data	Merge the meta data with the lipid data
pca_explained_var_plot	Make an explained variance plot
pca_loadings_plot	Make a PCA loadings plot
pca_observation_plot	Make a PCA observation plot
pca_scores_plot	Make a PCA scores plot
pca_variable_plot	Make a PCA variable plot
read_msdial	Read MS-DIAl files
select_identified	Keep only the identified lipids
set_issue_info	Merge the meta data with the lipid data
shinyAppServer	Shiny app server function
shinyAppUI	Shiny app server object
show_rsd_histogram	Show the histogram of all RSD values
show_rsd_lipidclass_histogram	Show the histogram of all RSD values per lipid class
show_rsd_lipidclass_violin	Show a violin plot of all RSD values per lipid class
tidy_lipids	Make the tibble in tidy format
volcano_plot	Create volcano plot