Files in rioualen/EcoliGenes
What the Package Does (One Line, Title Case)
.Rbuildignore
.gitignore
DESCRIPTION
EcoliGenes.Rproj
Generate_master.Rmd
NAMESPACE
R/convert_coords.R
R/convert_gene.R
R/convert_tf.R
R/get_gene_info.R
R/get_genes.R
R/get_tf_info.R
R/get_tfs.R
R/read_source_file.R
R/test_gene.R
R/test_interval.R
R/test_position.R
R/test_tf.R
README.md
img/conversion_tool.png
img/conversion_tools.png
img/ecoligenes_framework.png
img/gene_query.png
img/gene_tools.png
img/setup.png
img/tf_query.png
img/tf_tools.png
img/upset_tfs.png
inst/extdata/map-coords.tsv
inst/extdata/master_gene_file.tsv
inst/extdata/master_tf_file.tsv
man/closest_gene.Rd
man/convert_coords.Rd
man/convert_gene.Rd
man/convert_tf.Rd
man/get_all_genes.Rd
man/get_all_tfs.Rd
man/get_confirmed_tfs.Rd
man/get_downstream_gene.Rd
man/get_gene_bnumber.Rd
man/get_gene_info.Rd
man/get_gene_length.Rd
man/get_gene_start.Rd
man/get_gene_stop.Rd
man/get_gene_strand.Rd
man/get_gene_symbol.Rd
man/get_gene_synonyms.Rd
man/get_phantom_genes.Rd
man/get_predicted_tfs.Rd
man/get_pseudo_genes.Rd
man/get_tf_bnumber.Rd
man/get_tf_class.Rd
man/get_tf_effect.Rd
man/get_tf_family.Rd
man/get_tf_genes.Rd
man/get_tf_name.Rd
man/get_tf_symbol.Rd
man/get_tf_symmetry.Rd
man/get_tf_synonyms.Rd
man/get_tfs_by_family.Rd
man/get_upstream_gene.Rd
man/is_confirmed_tf.Rd
man/is_genic.Rd
man/is_phantom_gene.Rd
man/is_predicted_tf.Rd
man/is_pseudo_gene.Rd
man/is_tf.Rd
man/is_tf_gene.Rd
man/is_valid_bnumber.Rd
man/read_coords_file.Rd
man/read_master_gene_file.Rd
man/read_master_tf_file.Rd
man/read_source_file.Rd
man/what_genes.Rd
man/where_genic.Rd
man/where_genic_rel.Rd
sql/genes.sql
sql/genes_old.sql
sql/products.sql
sql/tfs.sql
tests/testthat.R
tests/testthat/test-bnumber_to_symbol.R
tests/testthat/test-read_master_gene_file.R
tests/testthat/test-symbol_to_bnumber.R
