Files in rnabioco/clustifyrdata
External data sets for clustifyr
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/check-bioc.yaml
.github/workflows/pkgdown.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/data.R
README.Rmd
README.md
_pkgdown.yml
clustifyrdata.Rproj
data-raw/DATASET.R
data-raw/check_compression.R
data-raw/downrefs.R
data-raw/gtex_bulk_matrix.R
data-raw/immgen_ref_withNA.R
data-raw/pbmc_avg.R
data-raw/pbmc_bulk_matrix.R
data-raw/pbmc_markers.R
data-raw/pbmc_markers_M3Drop.R
data-raw/pbmc_matrix.R
data-raw/pbmc_meta.R
data-raw/pbmc_vargenes.R
data-raw/ref_LEC.R
data-raw/ref_LEC_xiang.R
data-raw/ref_MCA.R
data-raw/ref_cortex_dev.R
data-raw/ref_hema_microarray.R
data-raw/ref_humanspleenDC.R
data-raw/ref_immgen.R
data-raw/ref_lymphnodestromal.R
data-raw/ref_moca_main.R
data-raw/ref_mouse.rnaseq.R
data-raw/ref_mousespleenDC.R
data-raw/ref_pan_indrop.R
data-raw/ref_pan_smartseq2.R
data-raw/ref_tabula_muris_drop.R
data-raw/ref_tabula_muris_facs.R
data-raw/s_small.R
data-raw/s_small3.R
data-raw/yan_ref.R
data/MCA_lung_mat.rda
data/MCA_lung_meta.rda
data/downrefs.rda
data/gtex_bulk_matrix.rda
data/hema_microarray_matrix.rda
data/pan_indrop_avg.rda
data/pan_indrop_markers.rda
data/pan_indrop_matrix.rda
data/pan_indrop_meta.rda
data/pan_indrop_vargenes.rda
data/pan_smartseq2_avg.rda
data/pan_smartseq2_matrix.rda
data/pan_smartseq2_meta.rda
data/pan_smartseq2_vargenes.rda
data/pbmc5_markers.rda
data/pbmc5_matrix.rda
data/pbmc5_meta.rda
data/pbmc_avg.rda
data/pbmc_markers.rda
data/pbmc_markers_M3Drop.rda
data/pbmc_matrix.rda
data/pbmc_matrix_small.rda
data/pbmc_meta.rda
data/pbmc_vargenes.rda
data/ref_LEC.rda
data/ref_LEC_xiang.rda
data/ref_MCA.rda
data/ref_cortex_dev.rda
data/ref_hema_microarray.rda
data/ref_humanspleenDC.rda
data/ref_immgen.rda
data/ref_lymphnodestromal.rda
data/ref_moca_main.rda
data/ref_mouse.rnaseq.rda
data/ref_mousespleenDC.rda
data/ref_pan_indrop.rda
data/ref_pan_smartseq2.rda
data/ref_tabula_muris_drop.rda
data/ref_tabula_muris_facs.rda
data/s_small.rda
data/s_small3.rda
data/yan_ref.rda
docs/404.html
docs/LICENSE-text.html
docs/LICENSE.html
docs/articles/atlascreation.html
docs/articles/atlascreation_files/header-attrs-2.1/header-attrs.js
docs/articles/benchmark.html
docs/articles/benchmark_files/header-attrs-2.1/header-attrs.js
docs/articles/download_refs.html
docs/articles/download_refs_files/header-attrs-2.1/header-attrs.js
docs/articles/geo-annotations.html
docs/articles/geo-annotations_files/header-attrs-2.1/header-attrs.js
docs/articles/img/test.png
docs/articles/index.html
docs/articles/otherformats.html
docs/articles/otherformats_files/header-attrs-2.1/header-attrs.js
docs/articles/othertools.html
docs/articles/othertools_files/header-attrs-2.1/header-attrs.js
docs/articles/references.html
docs/articles/references_files/header-attrs-2.1/header-attrs.js
docs/articles/visualizations.html
docs/articles/visualizations_files/figure-html/Correlation heatmap-1.png
docs/articles/visualizations_files/figure-html/Create tSNE-1.png
docs/articles/visualizations_files/figure-html/Label clusters with cell types-1.png
docs/articles/visualizations_files/figure-html/Overclustering test-1.png
docs/articles/visualizations_files/figure-html/Overlay corr coefficients-1.png
docs/articles/visualizations_files/figure-html/Overlay corr coefficients-2.png
docs/articles/visualizations_files/figure-html/Overlay gene expression-1.png
docs/articles/visualizations_files/figure-html/Overlay gene expression-2.png
docs/articles/visualizations_files/header-attrs-2.1/header-attrs.js
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/MCA_lung_mat.html
docs/reference/MCA_lung_meta.html
docs/reference/downrefs.html
docs/reference/gtex_bulk_matrix.html
docs/reference/index.html
docs/reference/pan_indrop_markers.html
docs/reference/pan_indrop_matrix.html
docs/reference/pan_indrop_meta.html
docs/reference/pan_indrop_vargenes.html
docs/reference/pan_smartseq2_matrix.html
docs/reference/pan_smartseq2_meta.html
docs/reference/pan_smartseq2_vargenes.html
docs/reference/pbmc5_markers.html
docs/reference/pbmc5_matrix.html
docs/reference/pbmc5_meta.html
docs/reference/pbmc_avg.html
docs/reference/pbmc_markers.html
docs/reference/pbmc_markers_M3Drop.html
docs/reference/pbmc_matrix.html
docs/reference/pbmc_meta.html
docs/reference/pbmc_vargenes.html
docs/reference/ref_MCA.html
docs/reference/ref_cortex_dev.html
docs/reference/ref_hema_microarray.html
docs/reference/ref_immgen.html
docs/reference/ref_moca_main.html
docs/reference/ref_mouse.rnaseq.html
docs/reference/ref_pan_indrop.html
docs/reference/ref_pan_smartseq2.html
docs/reference/ref_tabula_muris_drop.html
docs/reference/ref_tabula_muris_facs.html
docs/reference/s_small.html
docs/reference/s_small3.html
docs/reference/yan_ref.html
docs/sitemap.xml
inst/run_clustifyr.R
man/MCA_lung_mat.Rd
man/MCA_lung_meta.Rd
man/downrefs.Rd
man/gtex_bulk_matrix.Rd
man/pan_indrop_markers.Rd
man/pan_indrop_matrix.Rd
man/pan_indrop_meta.Rd
man/pan_indrop_vargenes.Rd
man/pan_smartseq2_matrix.Rd
man/pan_smartseq2_meta.Rd
man/pan_smartseq2_vargenes.Rd
man/pbmc5_markers.Rd
man/pbmc5_matrix.Rd
man/pbmc5_meta.Rd
man/pbmc_avg.Rd
man/pbmc_markers.Rd
man/pbmc_markers_M3Drop.Rd
man/pbmc_matrix.Rd
man/pbmc_meta.Rd
man/pbmc_vargenes.Rd
man/ref_MCA.Rd
man/ref_cortex_dev.Rd
man/ref_hema_microarray.Rd
man/ref_immgen.Rd
man/ref_moca_main.Rd
man/ref_mouse.rnaseq.Rd
man/ref_pan_indrop.Rd
man/ref_pan_smartseq2.Rd
man/ref_tabula_muris_drop.Rd
man/ref_tabula_muris_facs.Rd
man/s_small.Rd
man/s_small3.Rd
man/yan_ref.Rd
vignettes/atlascreation.Rmd
vignettes/benchmark.Rmd
vignettes/download_refs.Rmd
vignettes/geo-annotations.Rmd
vignettes/img/test.png
vignettes/otherformats.Rmd
vignettes/othertools.Rmd
vignettes/references.Rmd
vignettes/visualizations.Rmd
