Man pages for rnabioco/clustifyrdata
External data sets for clustifyr
| downrefs | table of references stored in clustifyrdata |
| gtex_bulk_matrix | Matrix of average gene expression from GTEx recount bulk RNA... |
| MCA_lung_mat | Matrix of single-cell RNA-seq cells of the lung. |
| MCA_lung_meta | Meta-data for single-cell RNA-seq of the lung. |
| pan_indrop_markers | Marker genes identified by Seurat from single-cell RNA-seq... |
| pan_indrop_matrix | Matrix of single-cell RNA-seq pancreas data using indrop... |
| pan_indrop_meta | Meta-data for single-cell RNA-seq pancreas data using indrop... |
| pan_indrop_vargenes | variable genes identified by Seurat from single-cell RNA-seq... |
| pan_smartseq2_matrix | Matrix of single-cell RNA-seq pancreas data using smartseq2... |
| pan_smartseq2_meta | Meta-data for single-cell RNA-seq pancreas data using... |
| pan_smartseq2_vargenes | variable genes identified by Seurat from single-cell RNA-seq... |
| pbmc5_markers | Marker genes identified by Seurat from single-cell RNA-seq... |
| pbmc5_matrix | Matrix of single-cell RNA-seq PBMCs from 5'end kit. |
| pbmc5_meta | Meta-data for single-cell RNA-seq PBMCs from 5'end kit. |
| pbmc_avg | Matrix of average gene expression per cluster from... |
| pbmc_markers | Marker genes identified by Seurat from single-cell RNA-seq... |
| pbmc_markers_M3Drop | Marker genes identified by M3Drop from single-cell RNA-seq... |
| pbmc_matrix | Matrix of single-cell RNA-seq PBMCs. |
| pbmc_meta | Meta-data for single-cell RNA-seq PBMCs. |
| pbmc_vargenes | variable genes identified by Seurat from single-cell RNA-seq... |
| ref_cortex_dev | Matrix of average gene detection on cortex development cell... |
| ref_hema_microarray | Matrix of average gene detection by microarray on sorted... |
| ref_immgen | Matrix of average gene expression from immgen data |
| ref_MCA | Matrix of average gene expression for single-cell RNA-seq. |
| ref_moca_main | Matrix of average gene expression per cluster from... |
| ref_mouse.rnaseq | Matrix of average gene expression from general mouse cell... |
| ref_pan_indrop | Matrix of average gene expression per cluster from... |
| ref_pan_smartseq2 | Matrix of average gene expression per cluster from... |
| ref_tabula_muris_drop | Matrix of average gene expression per cluster from... |
| ref_tabula_muris_facs | Matrix of average gene expression per cluster from... |
| s_small | Small clustered Seurat2 object |
| s_small3 | Small clustered Seurat3 object |
| yan_ref | Matrix of average gene expression from 'yan' human embryo... |
