Man pages for robingradin/bara
Batch Adjustment By Reference Alignment
| add_mean_and_sd | Adds the mean values and multiplies the data by the standard... |
| adjust_test_set | Adjusts test data to make the mean values of the reference... |
| apply_center_and_scale | Centers and scales the test data using the values estimated... |
| bara_adjust | Adjusts a test set using the set of reference samples |
| bara_fit | Creates a BARA fit object |
| bara_optimize_ext | This function can be used to optimize the number of... |
| center_and_scale | Centers and scales the matrix and returns mean and sd... |
| check_batch | Verifies the input format of the batch arguments. |
| check_matrix | Makes sure that x is a numeric matrix. |
| check_ref | Validates the format of the reference samples |
| check_svd_params | Get SVD dimension identification type |
| compress_data | Compress a dataset |
| generate_ref_lgl | Generate a logical vector where TRUE represent the index of a... |
| get_best_dimension | Determines which dimensions optimizes the performance score. |
| get_dim_sizes | Calculates the number of dimensions to retain given a... |
| get_right_vectors | Calculate the SVD and returns the right singular vectors... |
| reconstruct_data | Reconstructs the data to its original dimension |
| squish_train | Centers, possibly scales, compresses, reconstructs and... |
| truncate_bara_fit | Decreases the number of dimensions retained in a BaraFit... |
