API for roderickslieker/CONQUER
CONQUER
| Global functions | |
|---|---|
| AnalyseSNPs | Man page Source code |
| ClusterAgnesSpearman | Man page Source code |
| ClusterPam | Man page Source code |
| ConquerCircos | Source code |
| GeneNameToVersionedID | Man page Source code |
| KEGG_DATA | Man page |
| PlotChromatinStates | Source code |
| PrepareChromatinStates | Man page Source code |
| abstractAnalyze | Source code |
| agnesPearson | Man page Source code |
| build_Anno | Source code |
| calculateColocalization | Source code |
| calculateOdds | Man page Source code |
| chromInteractionsToBED | Man page Source code |
| entrezToENSEMBL | Source code |
| extract.LD | Man page Source code |
| extract.eQTLs | Man page Source code |
| extract.eQTLs.noLoad | Source code |
| extract.pathways | Man page Source code |
| getAllSNPLD | Man page Source code |
| getChromatinData | Man page Source code |
| getChromatinInteractionData | Man page Source code |
| getCoexpression | Man page Source code |
| getColocalization | Source code |
| getColocalizationSingle | Source code |
| getDataforSingleSNP | Source code |
| getEnrichREnrichment | Man page Source code |
| getExons | Man page Source code |
| getGeneExpressionLevels | Man page Source code |
| getGenes | Source code |
| getGenesInRegion | Source code |
| getLDLink | Man page Source code |
| getOdds | Source code |
| getRegion | Man page Source code |
| getVariantInfoEnsembl | Man page Source code |
| get_eQTL_bulk | Man page Source code |
| get_eQTL_precalculated | Man page Source code |
| geteQTLdata | Source code |
| plotAdvancedEnrichment | Source code |
| plotColoc | Source code |
| prepare_KEGG | Source code |
| resources | Man page |
| summarize | Man page Source code |
| updateallOR | Man page Source code |
| visualize | Man page Source code |
| visualizeDashboard | Man page Source code |
