romunov/transgt: Translate genotypes based on a translational table

Classical capillary genotyping results in different laboratories yielding relatively different absolute values of genotypes. As alleles are called based on the speed of travelled DNA particles, this can vary from one machine to another. Assuming you have reference sampled in a reference laboratory, you can construct a translation table. For well behaved loci, you can translate by substracting or adding to the length of DNA fragments, but some loci may be more problematic. In that case, you will need to map a specific translation value for each allele. This package supports translation of both of those cases.

Getting started

Package details

Maintainer
LicenseGPL-2
Version1.1.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("romunov/transgt")
romunov/transgt documentation built on Aug. 1, 2020, 7:28 p.m.