Files in rscherrer/EGS
.Rbuildignore
.gitignore
DESCRIPTION
EGS.Rproj
NAMESPACE
R/find_extinct.R
R/find_missing.R
R/is_extinct.R
R/is_missing.R
R/make_facet_labels.R
R/mrep.R
R/read_archfile.R
R/read_architecture.R
R/read_binary.R
R/read_counts.R
R/read_data.R
R/read_edges.R
R/read_individuals.R
R/read_loci.R
R/read_parameters.R
R/read_paramfile.R
R/read_population.R
R/read_time.R
R/read_total_counts.R
R/str2vec.R
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Cst_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Cst_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Cst_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/EI.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Fst_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Fst_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Fst_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Gst_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Gst_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Gst_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Pst_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Pst_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Pst_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Qst_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Qst_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/Qst_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/RI.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/SI.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/architecture.txt
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/count00.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/count01.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/count10.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/count11.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/fem0.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/fem1.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_Cst.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_Fst.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_Gst.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_Pst.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_Qst.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_alpha.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_freq.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_meang.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_varA.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_varD.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_varG.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_varI.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_varN.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/genome_varP.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/gmon.out
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/job.sh
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/mean00_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/mean00_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/mean00_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/mean01_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/mean01_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/mean01_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/mean10_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/mean10_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/mean10_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/mean11_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/mean11_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/mean11_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/network_avgi.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/network_avgj.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/network_corbreed.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/network_corfreq.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/network_corgen.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/parameters.txt
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/paramlog.txt
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/population_ecotype.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/population_habitat.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/population_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/population_xmidparent.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/population_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/population_ymidparent.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/population_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/population_zmidparent.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/resource00.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/resource01.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/resource10.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/resource11.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/slurm-10500175.out
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/slurm-10503397.out
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/time.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varA_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varA_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varA_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varD_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varD_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varD_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varG_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varG_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varG_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varI_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varI_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varI_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varN_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varN_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varN_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varP_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varP_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varP_z.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varT_x.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varT_y.dat
data/sim_hsymmetry_0_ecosel_0.6_dispersal_0.001_nvertices_100_100_100_scaleA_1_1_1_r3/varT_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Cst_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Cst_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Cst_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/EI.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Fst_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Fst_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Fst_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Gst_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Gst_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Gst_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Pst_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Pst_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Pst_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Qst_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Qst_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/Qst_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/RI.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/SI.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/architecture.txt
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/count00.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/count01.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/count10.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/count11.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/fem0.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/fem1.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_Cst.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_Fst.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_Gst.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_Pst.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_Qst.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_alpha.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_freq.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_meang.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_varA.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_varD.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_varG.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_varI.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_varN.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/genome_varP.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/gmon.out
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/job.sh
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/mean00_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/mean00_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/mean00_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/mean01_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/mean01_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/mean01_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/mean10_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/mean10_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/mean10_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/mean11_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/mean11_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/mean11_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/network_avgi.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/network_avgj.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/network_corbreed.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/network_corfreq.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/network_corgen.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/parameters.txt
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/paramlog.txt
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/population_ecotype.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/population_habitat.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/population_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/population_xmidparent.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/population_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/population_ymidparent.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/population_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/population_zmidparent.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/resource00.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/resource01.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/resource10.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/resource11.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/slurm-10483558.out
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/time.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varA_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varA_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varA_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varD_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varD_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varD_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varG_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varG_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varG_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varI_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varI_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varI_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varN_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varN_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varN_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varP_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varP_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varP_z.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varT_x.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varT_y.dat
data/sim_hsymmetry_1_ecosel_1.2_dispersal_0.01_nvertices_100_100_100_scaleA_1_1_1_r1/varT_z.dat
figures/boxplots/boxplots_rates_EI_batches_1_2.png
figures/boxplots/boxplots_rates_EI_batches_3_4.png
figures/boxplots/boxplots_rates_EI_batches_5_6.png
figures/boxplots/boxplots_rates_EI_h_0.25_s_1.2_batches_1_2.png
figures/boxplots/boxplots_rates_EI_h_0.5_s_1.2_batches_1_2.png
figures/boxplots/boxplots_rates_EI_h_0.75_s_1.2_batches_1_2.png
figures/boxplots/boxplots_rates_EI_h_0_s_1.2_batches_1_2.png
figures/boxplots/boxplots_rates_EI_h_1_s_1.2_batches_1_2.png
figures/cotrajectories/cotrajectories_EI_RI_sim1.png
figures/cotrajectories/cotrajectories_EI_SI_sim1.png
figures/heatmaps/mean/heatmap_EI_sim1.png
figures/heatmaps/mean/heatmap_RI_sim1.png
figures/heatmaps/mean/heatmap_SI_sim1.png
figures/heatmaps/number/heatmap_EI_sim1.png
figures/heatmaps/number/heatmap_RI_sim1.png
figures/heatmaps/number/heatmap_SI_sim1.png
figures/trajectories/trajectories_EI_sim1.png
figures/trajectories/trajectories_Fst_x_sim1.png
figures/trajectories/trajectories_Fst_y_sim1.png
figures/trajectories/trajectories_Fst_z_sim1.png
figures/trajectories/trajectories_RI_sim1.png
figures/trajectories/trajectories_SI_sim1.png
figures/trajectories/trajectories_varA_x_sim1.png
figures/trajectories/trajectories_varA_y_sim1.png
figures/trajectories/trajectories_varA_z_sim1.png
figures/trajectories/trajectories_varG_x_sim1.png
figures/trajectories/trajectories_varG_y_sim1.png
figures/trajectories/trajectories_varG_z_sim1.png
figures/trajectories/trajectories_varN_x_sim1.png
figures/trajectories/trajectories_varN_y_sim1.png
figures/trajectories/trajectories_varN_z_sim1.png
man/find_extinct.Rd
man/find_missing.Rd
man/hello.Rd
man/is_extinct.Rd
man/is_missing.Rd
man/mrep.Rd
man/read_archfile.Rd
man/read_architecture.Rd
man/read_binary.Rd
man/read_counts.Rd
man/read_data.Rd
man/read_edges.Rd
man/read_individuals.Rd
man/read_loci.Rd
man/read_parameters.Rd
man/read_paramfile.Rd
man/read_population.Rd
man/read_time.Rd
man/read_total_counts.Rd
man/str2vec.Rd
scripts/boxplots_speciation_rates.R
scripts/boxplots_speciation_rates2.R
scripts/genome_scans.R
scripts/heatmaps_parameter_space.R
scripts/heatmaps_parameter_space2.R
scripts/rerun_extinct_simulations.R
scripts/speciation_co_trajectories.R
scripts/speciation_co_trajectories_flat.R
scripts/speciation_trajectories.R
test.R
