saeyslab/CytofNorm: Normalisation of cytometry data measured across multiple batches

This package can be used to normalize cytometry samples when a control sample is taken along in each of the batches. This is done by first identifying multiple clusters/cell types, learning the batch effects from the control samples and applying quantile normalization on all markers of interest.

install.packages("remotes")
remotes::install_github("saeyslab/CytofNorm")