Man pages for sam-uofl/SwarnSeq
Detection of Differentially Expressed Genes from Single Cell RNA-seq Data
| CapEff | This function estimates the capture efficiencies of the cells... |
| dzinb | # This function computes the distribution of the zero... |
| optimcluster | This function decides the number of optimum cell clusters for... |
| SwarnClassDE | This function is used to classify the influential genes of... |
| SwarnSeq | This function is used to estimate the parameters for genes... |
| SwarnSeqLRT | This function is used to detect differentially expressed... |
| SwarnTopTags | This function selects the top genes in scRNA-seq data. |
| SwarnUnadjLRT | This function is used to detect differentially expressed... |
| SwarnUnadjSeq | This function is used to compute the estimate the parameters... |
| TestData | TestData: A test scRNA-seq real dataset for SwarnSeq |
| ZINBEM | This function estimates the MLE of the parameters through... |
| ZINBoptim | #This function optimises the likelihood function for a gene,... |
