Files in sap01/TGS
Rapid Reconstruction of Time-Varying Gene Regulatory Networks
.Rbuildignore
.Rprofile
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md
R/CompareNet.R
R/CondMutualInfo.R
R/RDataToCytoscape.R
R/TGS-package.R
R/calcPerfDiNet.R
R/checkUnrolledDbn.R
R/compute_cmi.R
R/convert_dinet_to_undinet.R
R/count_feed_fwd_edges_undi.R
R/discretizeData.R
R/genTrueNetFunc.R
R/graphFns.R
R/learnCmiNetStruct.R
R/learnDbnStruct3dParDeg1.R
R/learn_TGS.R
R/learn_mi_net_struct.R
R/rollDbn.R
README.md
TGS.Rproj
cran-comments.md
inst/CITATION
inst/extdata/DREAM3GoldStandard_InSilicoSize10_Yeast1_TrueNet.RData
inst/extdata/DmLc3A.RData
inst/extdata/DmLc3E.RData
inst/extdata/DmLc3L.RData
inst/extdata/DmLc3P.RData
inst/extdata/InSilicoSize10-Yeast1-null-mutants.tsv
inst/extdata/InSilicoSize10-Yeast1-trajectories.tsv
inst/extdata/Output_Ds10n/Result.RData
inst/extdata/Output_Ds10n/di.net.adj.matrix.RData
inst/extdata/Output_Ds10n/input.data.discr.RData
inst/extdata/Output_Ds10n/mi.net.adj.matrix.RData
inst/extdata/Output_Ds10n/mi.net.adj.matrix.wt.RData
inst/extdata/Output_Ds10n/mut.info.matrix.RData
inst/extdata/Output_Ds10n/net.sif
inst/extdata/Output_Ds10n/output.txt
inst/extdata/Output_Ds10n/sessionInfo.txt
inst/extdata/Output_Ds10n/unrolled.DBN.adj.matrix.list.RData
inst/extdata/Output_Ed10n/Result.RData
inst/extdata/Output_Ed10n/di.net.adj.matrix.RData
inst/extdata/Output_Ed10n/input.data.discr.RData
inst/extdata/Output_Ed10n/mi.net.adj.matrix.RData
inst/extdata/Output_Ed10n/mi.net.adj.matrix.wt.RData
inst/extdata/Output_Ed10n/mut.info.matrix.RData
inst/extdata/Output_Ed10n/net.sif
inst/extdata/Output_Ed10n/output.txt
inst/extdata/Output_Ed10n/sessionInfo.txt
inst/extdata/Output_Ed10n/unrolled.DBN.adj.matrix.list.RData
inst/extdata/Result_Ds10n.RData
inst/extdata/Result_Ed10n.RData
inst/extdata/edi-data-10n.tsv
inst/extdata/edi.net.10.adj.mx.RData
inst/extdata/input.DmLc3A.json
inst/extdata/input.DmLc3E.json
inst/extdata/input.DmLc3L.json
inst/extdata/input.DmLc3P.json
man/LearnTgs.Rd
man/TGS-package.Rd
packrat/init.R
packrat/packrat.lock
packrat/packrat.opts
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tests/testthat.R
tests/testthat/test-Ds10n.R
tests/testthat/test-Ed10n.R
vignettes/.gitignore
vignettes/chap_01_QuickStartGuide.Rmd
